Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.69■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.69■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.69■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.69■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.69■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 AC067852.2-201ENST00000590513 2313 ntBASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 AL356309.3-201ENST00000624132 1934 ntBASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.67■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.66■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 AC141586.5-201ENST00000624546 2050 ntBASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.65■□□□□ 0.42
BOLA2-SMG1P6H3BVE0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms