Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.76□□□□□ -0.05
SMKR1H3BMG3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.76□□□□□ -0.05
SMKR1H3BMG3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 AC090340.1-201ENST00000620778 4980 ntBASIC14.75□□□□□ -0.05
SMKR1H3BMG3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
SMKR1H3BMG3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMKR1H3BMG3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMKR1H3BMG3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMKR1H3BMG3 SYT6-210ENST00000641643 1587 ntBASIC14.73□□□□□ -0.05
SMKR1H3BMG3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMKR1H3BMG3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.73□□□□□ -0.05
SMKR1H3BMG3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMKR1H3BMG3 AC093484.2-201ENST00000580996 2166 ntBASIC14.73□□□□□ -0.05
SMKR1H3BMG3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMKR1H3BMG3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
SMKR1H3BMG3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMKR1H3BMG3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMKR1H3BMG3 SRD5A1P1-201ENST00000442297 786 ntBASIC14.73□□□□□ -0.05
SMKR1H3BMG3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms