Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.9■□□□□ 0.94
SRRM3A6NNA2 AC121338.2-201ENST00000622535 1744 ntBASIC20.9■□□□□ 0.94
SRRM3A6NNA2 AP000974.1-201ENST00000623909 2387 ntBASIC20.89■□□□□ 0.94
SRRM3A6NNA2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SRRM3A6NNA2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.89■□□□□ 0.94
SRRM3A6NNA2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SRRM3A6NNA2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
SRRM3A6NNA2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
SRRM3A6NNA2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SRRM3A6NNA2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SRRM3A6NNA2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SRRM3A6NNA2 DUSP5P2-201ENST00000426873 1033 ntBASIC20.89■□□□□ 0.93
SRRM3A6NNA2 AC007322.1-201ENST00000426983 750 ntBASIC20.89■□□□□ 0.93
SRRM3A6NNA2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SRRM3A6NNA2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.89■□□□□ 0.93
SRRM3A6NNA2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.89■□□□□ 0.93
SRRM3A6NNA2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SRRM3A6NNA2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SRRM3A6NNA2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SRRM3A6NNA2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.89■□□□□ 0.93
SRRM3A6NNA2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SRRM3A6NNA2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 RPS2P4-201ENST00000476944 856 ntBASIC20.88■□□□□ 0.93
SRRM3A6NNA2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 RNA5SP413-201ENST00000516373 109 ntBASIC20.88■□□□□ 0.93
SRRM3A6NNA2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.88■□□□□ 0.93
SRRM3A6NNA2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 AC098934.4-201ENST00000564127 592 ntBASIC20.87■□□□□ 0.93
SRRM3A6NNA2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SRRM3A6NNA2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 TCF3P1-201ENST00000423021 1937 ntBASIC20.86■□□□□ 0.93
SRRM3A6NNA2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SRRM3A6NNA2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.85■□□□□ 0.93
SRRM3A6NNA2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SRRM3A6NNA2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SRRM3A6NNA2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRRM3A6NNA2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms