Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 AC016769.1-201ENST00000409132 1010 ntBASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 DUX4L16-201ENST00000555130 1264 ntBASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 AL356652.1-201ENST00000615962 565 ntBASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM49BA6NDI0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM49BA6NDI0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 AC006015.1-201ENST00000429970 570 ntBASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 AL162430.1-201ENST00000480705 870 ntBASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 AC125437.2-201ENST00000625180 2167 ntBASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM49BA6NDI0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 AC068338.2-201ENST00000563278 1430 ntBASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 AL691432.2-201ENST00000607222 2038 ntBASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 LBX2-AS1-202ENST00000603175 2083 ntBASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM49BA6NDI0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
TRIM49BA6NDI0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
TRIM49BA6NDI0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
TRIM49BA6NDI0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
TRIM49BA6NDI0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM49BA6NDI0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms