Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PWAR5-201ENST00000624480 3180 ntBASIC7.07□□□□□ -1.28
FOXG1P55316 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXG1P55316 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
FOXG1P55316 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXG1P55316 AC091132.4-201ENST00000587960 2262 ntBASIC7.07□□□□□ -1.28
FOXG1P55316 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXG1P55316 AL031595.3-201ENST00000624919 14262 ntBASIC7.07□□□□□ -1.28
FOXG1P55316 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
FOXG1P55316 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXG1P55316 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
FOXG1P55316 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
FOXG1P55316 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
FOXG1P55316 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
FOXG1P55316 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXG1P55316 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXG1P55316 AL360295.1-201ENST00000425435 1824 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXG1P55316 PSMC1P3-201ENST00000453822 1318 ntBASIC7.06□□□□□ -1.28
FOXG1P55316 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
FOXG1P55316 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXG1P55316 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXG1P55316 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXG1P55316 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
FOXG1P55316 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
FOXG1P55316 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
FOXG1P55316 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
FOXG1P55316 SNORA71D-201ENST00000363484 134 ntBASIC7.06□□□□□ -1.28
FOXG1P55316 RNVU1-15-201ENST00000384476 165 ntBASIC7.06□□□□□ -1.28
FOXG1P55316 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXG1P55316 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXG1P55316 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXG1P55316 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXG1P55316 EFCAB14P1-201ENST00000442409 463 ntBASIC7.06□□□□□ -1.28
FOXG1P55316 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC7.06□□□□□ -1.28
FOXG1P55316 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXG1P55316 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXG1P55316 AC109439.1-201ENST00000511236 715 ntBASIC7.06□□□□□ -1.28
FOXG1P55316 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXG1P55316 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
FOXG1P55316 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXG1P55316 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC7.06□□□□□ -1.28
FOXG1P55316 PRR13-205ENST00000549068 755 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
FOXG1P55316 PRR13-207ENST00000549581 838 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
FOXG1P55316 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXG1P55316 SRMP2-201ENST00000553832 916 ntBASIC7.06□□□□□ -1.28
FOXG1P55316 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXG1P55316 AC139099.1-203ENST00000570366 607 ntTSL 3 BASIC7.06□□□□□ -1.28
FOXG1P55316 SKA2-203ENST00000578105 689 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXG1P55316 RPL23AP77-201ENST00000588044 463 ntBASIC7.06□□□□□ -1.28
FOXG1P55316 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXG1P55316 AL356052.1-201ENST00000605764 376 ntBASIC7.06□□□□□ -1.28
FOXG1P55316 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXG1P55316 AL353608.4-201ENST00000624487 1188 ntBASIC7.06□□□□□ -1.28
FOXG1P55316 AC010480.1-201ENST00000624823 684 ntBASIC7.06□□□□□ -1.28
FOXG1P55316 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXG1P55316 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXG1P55316 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
FOXG1P55316 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
FOXG1P55316 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
FOXG1P55316 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
FOXG1P55316 INTS4-211ENST00000535943 1382 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXG1P55316 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXG1P55316 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC7.06□□□□□ -1.28
FOXG1P55316 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC7.06□□□□□ -1.28
FOXG1P55316 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXG1P55316 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC7.06□□□□□ -1.28
FOXG1P55316 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXG1P55316 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXG1P55316 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
FOXG1P55316 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
FOXG1P55316 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
FOXG1P55316 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 MAPK10-285ENST00000641207 2746 ntBASIC7.05□□□□□ -1.28
FOXG1P55316 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
FOXG1P55316 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
FOXG1P55316 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC7.05□□□□□ -1.28
FOXG1P55316 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 ZNF816-ZNF321P-201ENST00000391777 1252 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
FOXG1P55316 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXG1P55316 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXG1P55316 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXG1P55316 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXG1P55316 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXG1P55316 RPL12P21-201ENST00000472214 518 ntBASIC7.05□□□□□ -1.28
FOXG1P55316 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC7.05□□□□□ -1.28
FOXG1P55316 TXK-203ENST00000507351 1153 ntTSL 2 BASIC7.05□□□□□ -1.28
FOXG1P55316 RN7SKP14-201ENST00000516000 329 ntBASIC7.05□□□□□ -1.28
FOXG1P55316 IGKV3-34-201ENST00000521692 293 ntBASIC7.05□□□□□ -1.28
FOXG1P55316 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
FOXG1P55316 FTH1-207ENST00000532601 742 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXG1P55316 TBC1D21-202ENST00000535547 1005 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXG1P55316 MRPL40P1-201ENST00000542687 604 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms