Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SNX18P9-201ENST00000440580 835 ntBASIC8.57□□□□□ -1.04
MTHFRP42898 RN7SL282P-201ENST00000479676 297 ntBASIC8.57□□□□□ -1.04
MTHFRP42898 AC018639.1-201ENST00000492994 442 ntBASIC8.57□□□□□ -1.04
MTHFRP42898 AF186996.2-201ENST00000508347 907 ntBASIC8.57□□□□□ -1.04
MTHFRP42898 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
MTHFRP42898 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC8.57□□□□□ -1.04
MTHFRP42898 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC8.57□□□□□ -1.04
MTHFRP42898 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
MTHFRP42898 HNRNPA1P67-201ENST00000604027 926 ntBASIC8.57□□□□□ -1.04
MTHFRP42898 OR5AU1-204ENST00000641822 1197 ntBASIC8.57□□□□□ -1.04
MTHFRP42898 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
MTHFRP42898 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
MTHFRP42898 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
MTHFRP42898 CASR-201ENST00000490131 4015 ntTSL 5 BASIC8.57□□□□□ -1.04
MTHFRP42898 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.57□□□□□ -1.04
MTHFRP42898 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
MTHFRP42898 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
MTHFRP42898 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
MTHFRP42898 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC8.57□□□□□ -1.04
MTHFRP42898 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
MTHFRP42898 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
MTHFRP42898 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC8.57□□□□□ -1.04
MTHFRP42898 LINC01800-201ENST00000445865 1977 ntTSL 2 BASIC8.57□□□□□ -1.04
MTHFRP42898 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
MTHFRP42898 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
MTHFRP42898 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
MTHFRP42898 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.57□□□□□ -1.04
MTHFRP42898 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 RASA2-201ENST00000286364 5614 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 MYLK-220ENST00000578202 1447 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 LINC01139-201ENST00000400946 1537 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
MTHFRP42898 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
MTHFRP42898 CCNYL3-201ENST00000407030 998 ntBASIC8.56□□□□□ -1.04
MTHFRP42898 AC023141.1-201ENST00000419418 379 ntBASIC8.56□□□□□ -1.04
MTHFRP42898 Z97634.1-203ENST00000435229 471 ntBASIC8.56□□□□□ -1.04
MTHFRP42898 AC097358.1-201ENST00000438827 582 ntBASIC8.56□□□□□ -1.04
MTHFRP42898 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC8.56□□□□□ -1.04
MTHFRP42898 PPP1R8P1-201ENST00000452549 1044 ntBASIC8.56□□□□□ -1.04
MTHFRP42898 AC004801.2-201ENST00000468202 779 ntBASIC8.56□□□□□ -1.04
MTHFRP42898 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC8.56□□□□□ -1.04
MTHFRP42898 RN7SL89P-201ENST00000480252 283 ntBASIC8.56□□□□□ -1.04
MTHFRP42898 AC093010.2-201ENST00000481773 743 ntTSL 3 BASIC8.56□□□□□ -1.04
MTHFRP42898 HSPD1P18-201ENST00000504252 244 ntBASIC8.56□□□□□ -1.04
MTHFRP42898 OR10J9P-201ENST00000511932 987 ntBASIC8.56□□□□□ -1.04
MTHFRP42898 KRT18P54-201ENST00000513396 748 ntBASIC8.56□□□□□ -1.04
MTHFRP42898 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC8.56□□□□□ -1.04
MTHFRP42898 SLC25A3P2-201ENST00000547720 880 ntBASIC8.56□□□□□ -1.04
MTHFRP42898 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC8.56□□□□□ -1.04
MTHFRP42898 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC8.56□□□□□ -1.04
MTHFRP42898 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC8.56□□□□□ -1.04
MTHFRP42898 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC8.56□□□□□ -1.04
MTHFRP42898 MIR3159-201ENST00000584572 74 ntBASIC8.56□□□□□ -1.04
MTHFRP42898 VDAC1P5-201ENST00000603132 844 ntBASIC8.56□□□□□ -1.04
MTHFRP42898 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC8.56□□□□□ -1.04
MTHFRP42898 RPL36AP21-202ENST00000639134 430 ntBASIC8.56□□□□□ -1.04
MTHFRP42898 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
MTHFRP42898 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.56□□□□□ -1.04
MTHFRP42898 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.56□□□□□ -1.04
MTHFRP42898 LINC01291-201ENST00000377469 3662 ntTSL 2 BASIC8.56□□□□□ -1.04
MTHFRP42898 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC8.56□□□□□ -1.04
MTHFRP42898 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
MTHFRP42898 ZBTB14-207ENST00000614697 3341 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
MTHFRP42898 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
MTHFRP42898 LINC00558-201ENST00000569422 3163 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
MTHFRP42898 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
MTHFRP42898 SHQ1-203ENST00000463369 2065 ntTSL 2 BASIC8.55□□□□□ -1.04
MTHFRP42898 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
MTHFRP42898 ATP5E-201ENST00000243997 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
MTHFRP42898 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
MTHFRP42898 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
MTHFRP42898 DCN-220ENST00000552962 1930 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
MTHFRP42898 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
MTHFRP42898 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC8.55□□□□□ -1.04
MTHFRP42898 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC8.55□□□□□ -1.04
MTHFRP42898 U3.18-201ENST00000390880 216 ntBASIC8.55□□□□□ -1.04
MTHFRP42898 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC8.55□□□□□ -1.04
MTHFRP42898 MED15P9-201ENST00000424716 533 ntBASIC8.55□□□□□ -1.04
MTHFRP42898 AL022721.1-201ENST00000436521 505 ntBASIC8.55□□□□□ -1.04
MTHFRP42898 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC8.55□□□□□ -1.04
MTHFRP42898 RPL10P6-201ENST00000457497 318 ntBASIC8.55□□□□□ -1.04
MTHFRP42898 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC8.55□□□□□ -1.04
MTHFRP42898 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC8.55□□□□□ -1.04
MTHFRP42898 AC107385.1-201ENST00000507985 778 ntBASIC8.55□□□□□ -1.04
MTHFRP42898 AC111000.1-201ENST00000514545 713 ntBASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms