Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 LINC01180-201ENST00000589259 2025 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 LUCAT1-203ENST00000513626 2672 ntTSL 2 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 IL26-201ENST00000229134 1075 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 OR4N4-201ENST00000328795 1126 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 RN7SKP48-201ENST00000365031 328 ntBASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 ZNF738-202ENST00000380870 1142 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 SMARCA2-205ENST00000382183 1178 ntTSL 5 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 IGLC6-201ENST00000410078 317 ntBASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 CTSLP8-201ENST00000413075 967 ntBASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 AC003080.1-201ENST00000413552 767 ntBASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 LINC01363-201ENST00000426709 971 ntTSL 5 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 SERPINA7P1-201ENST00000443077 631 ntBASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 POLB-211ENST00000521492 786 ntTSL 2 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 SRMP2-201ENST00000553832 916 ntBASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 AC015818.5-201ENST00000578659 356 ntBASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 AC093826.2-201ENST00000579042 108 ntBASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 YTHDF2P1-201ENST00000604759 1271 ntBASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 AC113554.1-201ENST00000606284 490 ntBASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 AC009159.3-201ENST00000615570 804 ntBASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 AC135068.3-201ENST00000623441 1125 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 AC010480.1-201ENST00000624823 684 ntBASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 AC099654.11-201ENST00000638857 294 ntBASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 AP001347.1-201ENST00000428809 1332 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 CYP4A22-203ENST00000371891 2535 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 AC138207.6-201ENST00000579164 1967 ntBASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 AL136140.2-201ENST00000624717 1705 ntBASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 AF064858.1-201ENST00000417335 1412 ntTSL 5 BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPIPA3F8WFD2 EXOC7P1-201ENST00000509881 2059 ntBASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 SLC2A14-215ENST00000542546 3120 ntTSL 5 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 MIR595-201ENST00000384905 96 ntBASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 AC019181.1-201ENST00000417151 310 ntBASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 YBX1P8-201ENST00000421881 943 ntBASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 RPL23AP34-201ENST00000423483 410 ntBASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 METTL8P1-201ENST00000428182 611 ntBASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 KDM4A-AS1-203ENST00000434346 833 ntTSL 5 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 AL021939.1-201ENST00000441868 886 ntBASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 GAS5-219ENST00000449289 542 ntTSL 3 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 AP001025.3-201ENST00000578787 864 ntTSL 3 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 MIR4682-201ENST00000580643 80 ntBASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 MIR3689C-201ENST00000581239 72 ntBASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 AP004247.4-201ENST00000608484 942 ntBASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 MIR6829-201ENST00000620375 67 ntBASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 SNHG5-218ENST00000623901 711 ntTSL 5 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 AC004009.3-201ENST00000624160 645 ntBASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 LRRC37A11P-202ENST00000579258 3717 ntBASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 PSMC1-202ENST00000543772 1389 ntTSL 2 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 IRAK4-202ENST00000440781 1409 ntTSL 2 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms