Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 PDCD10-218ENST00000497056 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SNX18Q96RF0 AC108073.1-201ENST00000508231 674 ntBASIC7.51□□□□□ -1.21
SNX18Q96RF0 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 AC091951.4-201ENST00000512746 332 ntTSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SNX18Q96RF0 AC018653.2-201ENST00000540190 238 ntBASIC7.51□□□□□ -1.21
SNX18Q96RF0 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 RPL17-212ENST00000581373 584 ntTSL 2 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 GLUD1P2-201ENST00000583339 201 ntBASIC7.51□□□□□ -1.21
SNX18Q96RF0 GLUD1P8-201ENST00000585063 203 ntBASIC7.51□□□□□ -1.21
SNX18Q96RF0 EIF5AP3-201ENST00000589460 462 ntBASIC7.51□□□□□ -1.21
SNX18Q96RF0 AL161725.1-211ENST00000592805 889 ntTSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 INTS6-AS1-204ENST00000593709 648 ntTSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 AL118556.2-201ENST00000614375 824 ntBASIC7.51□□□□□ -1.21
SNX18Q96RF0 MIR6737-201ENST00000617385 70 ntBASIC7.51□□□□□ -1.21
SNX18Q96RF0 CD200R1L-205ENST00000617549 762 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 AC027176.3-201ENST00000624460 586 ntBASIC7.51□□□□□ -1.21
SNX18Q96RF0 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 TCL6-207ENST00000483087 2194 ntTSL 2 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SNX18Q96RF0 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SNX18Q96RF0 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 FAM205BP-202ENST00000399773 4009 ntBASIC7.51□□□□□ -1.21
SNX18Q96RF0 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SNX18Q96RF0 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 LINC01748-205ENST00000635616 2143 ntTSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 SSX2B-204ENST00000616191 1344 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC7.51□□□□□ -1.21
SNX18Q96RF0 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SNX18Q96RF0 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC108463.3-201ENST00000603748 1482 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 OR51A10P-201ENST00000307165 937 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 FCAR-206ENST00000391724 762 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 OR13D3P-201ENST00000412501 937 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC116050.1-206ENST00000423774 213 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC245047.5-201ENST00000437312 556 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 MIR4435-2HG-208ENST00000439494 707 ntTSL 5 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 LDHAP3-201ENST00000448312 1008 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 AL392003.2-201ENST00000451015 679 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC092042.1-201ENST00000457115 509 ntTSL 3 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 PCBP1-AS1-242ENST00000458686 1020 ntTSL 5 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 RPS12P20-201ENST00000464109 380 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC125618.1-201ENST00000472596 563 ntTSL 4 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC111000.5-201ENST00000506559 1178 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 OR10J2P-201ENST00000514684 961 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC109588.1-202ENST00000515720 880 ntTSL 3 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 IGHVII-30-1-201ENST00000522218 301 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC073913.2-201ENST00000541512 145 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC139099.1-203ENST00000570366 607 ntTSL 3 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 CFAP52-208ENST00000576499 711 ntTSL 3 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 AP005901.4-201ENST00000577336 569 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC087393.3-201ENST00000584971 166 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 LINC00662-207ENST00000590677 883 ntTSL 5 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 LGALS17A-205ENST00000598736 1111 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC005261.1-201ENST00000601567 712 ntTSL 2 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 IGKV3OR2-5-201ENST00000605851 281 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 GNG2-216ENST00000615906 1294 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 RBBP4P3-201ENST00000619705 1283 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 CU633967.1-202ENST00000623449 560 ntTSL 5 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 CU638689.5-201ENST00000623892 1032 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC130448.2-201ENST00000624082 374 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC026336.5-201ENST00000624455 738 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 LINC01002-219ENST00000632747 621 ntTSL 5 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 OLMALINC-206ENST00000641799 1195 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 AC120114.2-201ENST00000567795 2272 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 TNFSF15-201ENST00000374044 2789 ntBASIC7.5□□□□□ -1.21
SNX18Q96RF0 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNX18Q96RF0 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 DAZ4-203ENST00000382432 2405 ntTSL 5 BASIC7.5□□□□□ -1.21
SNX18Q96RF0 DAZ2-205ENST00000382433 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms