Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 QTRT1-202ENST00000421333 1502 ntTSL 215.31■□□□□ 0.041e-7■■□□□ 12.9
PRPF8Q6P2Q9 QTRT1-206ENST00000587861 2034 ntTSL 213.55□□□□□ -0.249e-15■■□□□ 12.9
PRPF8Q6P2Q9 FASN-207ENST00000635197 627 ntTSL 313.72□□□□□ -0.216e-26■■□□□ 12.9
PRPF8Q6P2Q9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.14■□□□□ 0.332e-7■■□□□ 12.9
PRPF8Q6P2Q9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.162e-7■■□□□ 12.9
PRPF8Q6P2Q9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.332e-7■■□□□ 12.9
PRPF8Q6P2Q9 CBFB-206ENST00000565389 846 ntTSL 1 (best)7.9□□□□□ -1.152e-7■■□□□ 12.9
PRPF8Q6P2Q9 RELA-212ENST00000527874 578 ntTSL 47.32□□□□□ -1.241e-6■■□□□ 12.9
PRPF8Q6P2Q9 SEPT5-203ENST00000406172 1996 ntTSL 519.81■□□□□ 0.764e-7■■□□□ 12.9
PRPF8Q6P2Q9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.92■□□□□ 0.624e-7■■□□□ 12.9
PRPF8Q6P2Q9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.414e-7■■□□□ 12.9
PRPF8Q6P2Q9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.26■□□□□ 0.194e-7■■□□□ 12.9
PRPF8Q6P2Q9 SEPT5-205ENST00000412544 1108 ntTSL 513.86□□□□□ -0.194e-7■■□□□ 12.9
PRPF8Q6P2Q9 SEPT5-208ENST00000431124 920 ntTSL 513.23□□□□□ -0.294e-7■■□□□ 12.9
PRPF8Q6P2Q9 SEPT5-211ENST00000455843 4113 ntTSL 1 (best)12.9□□□□□ -0.354e-7■■□□□ 12.9
PRPF8Q6P2Q9 SEPT5-207ENST00000431044 3173 ntTSL 1 (best)12.84□□□□□ -0.354e-7■■□□□ 12.9
PRPF8Q6P2Q9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.72□□□□□ -0.374e-7■■□□□ 12.9
PRPF8Q6P2Q9 ATF6B-215ENST00000492342 819 ntTSL 313.13□□□□□ -0.314e-12■■□□□ 12.9
PRPF8Q6P2Q9 DCAF8-209ENST00000466253 1078 ntTSL 57.95□□□□□ -1.142e-10■■□□□ 12.9
PRPF8Q6P2Q9 PACS2-214ENST00000552138 765 ntTSL 212.04□□□□□ -0.481e-6■■□□□ 12.9
PRPF8Q6P2Q9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.91■□□□□ 0.465e-7■■□□□ 12.9
PRPF8Q6P2Q9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.055e-7■■□□□ 12.9
PRPF8Q6P2Q9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.97□□□□□ -0.015e-7■■□□□ 12.9
PRPF8Q6P2Q9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.395e-7■■□□□ 12.9
PRPF8Q6P2Q9 HDLBP-215ENST00000427487 924 ntTSL 59.93□□□□□ -0.822e-11■■□□□ 12.9
PRPF8Q6P2Q9 MRPL19-205ENST00000476622 744 ntTSL 212.1□□□□□ -0.471e-6■■□□□ 12.9
PRPF8Q6P2Q9 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.63□□□□□ -1.675e-9■■□□□ 12.9
PRPF8Q6P2Q9 GRAMD1A-210ENST00000599476 599 ntTSL 26.64□□□□□ -1.352e-7■■□□□ 12.9
PRPF8Q6P2Q9 ENTPD6-217ENST00000485936 2588 ntTSL 211.48□□□□□ -0.573e-7■■□□□ 12.9
PRPF8Q6P2Q9 GTPBP3-212ENST00000596125 644 ntTSL 217.21■□□□□ 0.352e-6■■□□□ 12.9
PRPF8Q6P2Q9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.727e-7■■□□□ 12.9
PRPF8Q6P2Q9 PRSS21-203ENST00000570594 809 ntTSL 316.17■□□□□ 0.187e-7■■□□□ 12.9
PRPF8Q6P2Q9 PRSS21-207ENST00000574813 873 ntTSL 315.79■□□□□ 0.127e-7■■□□□ 12.9
PRPF8Q6P2Q9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.21■□□□□ 0.037e-7■■□□□ 12.9
PRPF8Q6P2Q9 PRSS21-204ENST00000570629 626 ntTSL 210.51□□□□□ -0.737e-7■■□□□ 12.9
PRPF8Q6P2Q9 MYO9B-203ENST00000593533 978 ntTSL 1 (best)9.07□□□□□ -0.964e-8■■□□□ 12.9
PRPF8Q6P2Q9 ZNF444-205ENST00000587467 646 ntTSL 219.43■□□□□ 0.71e-7■■□□□ 12.9
PRPF8Q6P2Q9 ZNF444-203ENST00000587195 571 ntTSL 419.41■□□□□ 0.71e-7■■□□□ 12.9
PRPF8Q6P2Q9 NUCB1-207ENST00000452087 864 ntTSL 316.12■□□□□ 0.172e-6■■□□□ 12.9
PRPF8Q6P2Q9 ARHGAP27-204ENST00000524404 969 ntTSL 314.66□□□□□ -0.062e-6■■□□□ 12.9
PRPF8Q6P2Q9 ARHGAP27-210ENST00000529357 1709 ntTSL 211.93□□□□□ -0.52e-6■■□□□ 12.9
PRPF8Q6P2Q9 ZC3H11A-205ENST00000432282 682 ntTSL 57.81□□□□□ -1.164e-9■■□□□ 12.9
PRPF8Q6P2Q9 MGAT5-204ENST00000481801 651 ntTSL 320.82■□□□□ 0.922e-8■■□□□ 12.9
PRPF8Q6P2Q9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.68■□□□□ 0.748e-6■■□□□ 12.9
PRPF8Q6P2Q9 STK19-211ENST00000479644 1352 ntTSL 219.22■□□□□ 0.678e-6■■□□□ 12.9
PRPF8Q6P2Q9 PDE4C-217ENST00000610023 583 ntTSL 418.16■□□□□ 0.58e-6■■□□□ 12.9
PRPF8Q6P2Q9 LINC01881-207ENST00000622435 555 ntTSL 517.8■□□□□ 0.448e-6■■□□□ 12.9
PRPF8Q6P2Q9 LINC01881-204ENST00000444990 557 ntTSL 317.38■□□□□ 0.378e-6■■□□□ 12.9
PRPF8Q6P2Q9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.33■□□□□ 0.368e-6■■□□□ 12.9
PRPF8Q6P2Q9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.38e-6■■□□□ 12.9
PRPF8Q6P2Q9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.92■□□□□ 0.38e-6■■□□□ 12.9
PRPF8Q6P2Q9 PDE4C-205ENST00000593594 481 ntTSL 1 (best)16.42■□□□□ 0.228e-6■■□□□ 12.9
PRPF8Q6P2Q9 PDE4C-208ENST00000595343 420 ntTSL 1 (best)16.42■□□□□ 0.228e-6■■□□□ 12.9
PRPF8Q6P2Q9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.08■□□□□ 0.168e-6■■□□□ 12.9
PRPF8Q6P2Q9 AIF1L-209ENST00000472942 899 ntTSL 316.08■□□□□ 0.168e-6■■□□□ 12.9
PRPF8Q6P2Q9 MON1B-209ENST00000567291 1110 ntTSL 315.8■□□□□ 0.127e-11■■□□□ 12.9
PRPF8Q6P2Q9 MON1B-210ENST00000569610 611 ntTSL 415.8■□□□□ 0.127e-11■■□□□ 12.9
PRPF8Q6P2Q9 LINC01881-202ENST00000431796 565 ntTSL 415.56■□□□□ 0.088e-6■■□□□ 12.9
PRPF8Q6P2Q9 VPS53-218ENST00000575207 575 ntTSL 415.49■□□□□ 0.078e-6■■□□□ 12.9
PRPF8Q6P2Q9 MON1B-208ENST00000566963 915 ntTSL 215.37■□□□□ 0.057e-11■■□□□ 12.9
PRPF8Q6P2Q9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.31■□□□□ 0.048e-6■■□□□ 12.9
PRPF8Q6P2Q9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.28■□□□□ 0.048e-6■■□□□ 12.9
PRPF8Q6P2Q9 TECPR1-214ENST00000483740 684 ntTSL 315.23■□□□□ 0.038e-6■■□□□ 12.9
PRPF8Q6P2Q9 WDR97-205ENST00000533108 989 ntTSL 215.21■□□□□ 0.028e-6■■□□□ 12.9
PRPF8Q6P2Q9 SLC39A13-209ENST00000529740 558 ntTSL 215.2■□□□□ 0.028e-6■■□□□ 12.9
PRPF8Q6P2Q9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.01□□□□□ -0.012e-6■■□□□ 12.9
PRPF8Q6P2Q9 L3MBTL1-212ENST00000468336 751 ntTSL 214.98□□□□□ -0.012e-8■■□□□ 12.9
PRPF8Q6P2Q9 IZUMO4-209ENST00000590985 807 ntTSL 214.91□□□□□ -0.028e-6■■□□□ 12.9
PRPF8Q6P2Q9 TOM1-213ENST00000465529 555 ntTSL 214.71□□□□□ -0.058e-6■■□□□ 12.9
PRPF8Q6P2Q9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.43□□□□□ -0.18e-6■■□□□ 12.9
PRPF8Q6P2Q9 SIRT2-214ENST00000476771 584 ntTSL 514.33□□□□□ -0.118e-6■■□□□ 12.9
PRPF8Q6P2Q9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.21□□□□□ -0.138e-6■■□□□ 12.9
PRPF8Q6P2Q9 CALCOCO1-220ENST00000552282 569 ntTSL 214.13□□□□□ -0.158e-6■■□□□ 12.9
PRPF8Q6P2Q9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.07□□□□□ -0.167e-11■■□□□ 12.9
PRPF8Q6P2Q9 L3MBTL1-215ENST00000473981 566 ntTSL 313.93□□□□□ -0.182e-8■■□□□ 12.9
PRPF8Q6P2Q9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.212e-6■■□□□ 12.9
PRPF8Q6P2Q9 MON1B-206ENST00000564006 948 ntTSL 213.57□□□□□ -0.247e-11■■□□□ 12.9
PRPF8Q6P2Q9 TNK2-221ENST00000489628 1220 ntTSL 513.48□□□□□ -0.252e-8■■□□□ 12.9
PRPF8Q6P2Q9 N4BP2L1-206ENST00000464470 1145 ntTSL 213.35□□□□□ -0.278e-6■■□□□ 12.9
PRPF8Q6P2Q9 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.288e-6■■□□□ 12.9
PRPF8Q6P2Q9 SPAG7-208ENST00000575784 694 ntTSL 313.29□□□□□ -0.288e-6■■□□□ 12.9
PRPF8Q6P2Q9 L3MBTL1-207ENST00000430781 903 ntTSL 1 (best)13.23□□□□□ -0.292e-8■■□□□ 12.9
PRPF8Q6P2Q9 CRACR2B-213ENST00000534191 1154 ntTSL 213.19□□□□□ -0.38e-6■■□□□ 12.9
PRPF8Q6P2Q9 NPEPL1-202ENST00000525068 768 ntTSL 213.18□□□□□ -0.38e-21■■□□□ 12.9
PRPF8Q6P2Q9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.11□□□□□ -0.317e-11■■□□□ 12.9
PRPF8Q6P2Q9 POLD4-204ENST00000529000 543 ntTSL 513.06□□□□□ -0.328e-6■■□□□ 12.9
PRPF8Q6P2Q9 AIF1L-210ENST00000478257 880 ntTSL 512.87□□□□□ -0.358e-6■■□□□ 12.9
PRPF8Q6P2Q9 ZFAND2B-218ENST00000476713 562 ntTSL 212.77□□□□□ -0.368e-6■■□□□ 12.9
PRPF8Q6P2Q9 SIRT2-215ENST00000479290 4734 ntTSL 212.76□□□□□ -0.378e-6■■□□□ 12.9
PRPF8Q6P2Q9 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.72□□□□□ -0.372e-6■■□□□ 12.9
PRPF8Q6P2Q9 PDE4C-212ENST00000597573 603 ntTSL 212.71□□□□□ -0.388e-6■■□□□ 12.9
PRPF8Q6P2Q9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.388e-6■■□□□ 12.9
PRPF8Q6P2Q9 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.58□□□□□ -0.48e-6■■□□□ 12.9
PRPF8Q6P2Q9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC12.57□□□□□ -0.48e-6■■□□□ 12.9
PRPF8Q6P2Q9 SIRT2-207ENST00000420440 927 ntTSL 512.53□□□□□ -0.48e-6■■□□□ 12.9
PRPF8Q6P2Q9 SIRT2-213ENST00000462654 2539 ntTSL 1 (best)12.52□□□□□ -0.48e-6■■□□□ 12.9
PRPF8Q6P2Q9 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.428e-6■■□□□ 12.9
PRPF8Q6P2Q9 SEMA6B-203ENST00000589889 563 ntTSL 412.39□□□□□ -0.438e-6■■□□□ 12.9
PRPF8Q6P2Q9 SIRT2-203ENST00000381766 848 ntTSL 212.18□□□□□ -0.468e-6■■□□□ 12.9
PRPF8Q6P2Q9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.468e-6■■□□□ 12.9
Retrieved 100 of 73,762 protein–RNA pairs in 731 ms