Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP1Q96SZ6 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC8.54□□□□□ -1.04
CDK5RAP1Q96SZ6 AC114786.2-201ENST00000510090 1426 ntBASIC8.54□□□□□ -1.04
CDK5RAP1Q96SZ6 SCHLAP1-201ENST00000629145 1436 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP1Q96SZ6 MAPK10-371ENST00000641952 5209 ntBASIC8.54□□□□□ -1.04
CDK5RAP1Q96SZ6 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.54□□□□□ -1.04
CDK5RAP1Q96SZ6 AL513523.1-201ENST00000417868 1309 ntBASIC8.54□□□□□ -1.04
CDK5RAP1Q96SZ6 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC8.54□□□□□ -1.04
CDK5RAP1Q96SZ6 AP001347.1-201ENST00000428809 1332 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP1Q96SZ6 DDX11L16-201ENST00000507418 1306 ntBASIC8.54□□□□□ -1.04
CDK5RAP1Q96SZ6 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP1Q96SZ6 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 NVL-212ENST00000469968 2510 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 AC092718.7-201ENST00000623577 1776 ntBASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 GULP1-202ENST00000409580 3544 ntAPPRIS P3 TSL 2 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 MIR30C1-201ENST00000385227 89 ntBASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 AL049758.1-201ENST00000423154 397 ntBASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 AP001342.1-201ENST00000423389 525 ntBASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 PSMC1P2-201ENST00000423961 1204 ntBASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 EIF4A1P10-201ENST00000428832 1216 ntBASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 ZNF736P1Y-201ENST00000440402 1276 ntBASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 YWHABP1-201ENST00000445359 727 ntBASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 RN7SL241P-201ENST00000482973 236 ntBASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 AL031073.1-201ENST00000503029 1139 ntBASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 AC008667.3-201ENST00000506892 553 ntTSL 4 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 FAXDC2-206ENST00000518651 536 ntTSL 4 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 RPL10P19-201ENST00000519013 301 ntBASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 IGKV3-34-201ENST00000521692 293 ntBASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 PTK2-241ENST00000522950 548 ntTSL 4 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 AC034105.2-201ENST00000561866 238 ntBASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 ZNF771-203ENST00000564550 1187 ntTSL 5 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 LINC00662-207ENST00000590677 883 ntTSL 5 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 AL109933.4-201ENST00000612111 157 ntBASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 AC016999.2-201ENST00000614692 556 ntBASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 EIF5P2-201ENST00000618904 1035 ntBASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 MYO1A-201ENST00000300119 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 SLAMF7-211ENST00000621377 2608 ntTSL 2 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 CFI-207ENST00000618244 1345 ntTSL 5 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
CDK5RAP1Q96SZ6 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
CDK5RAP1Q96SZ6 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC8.52□□□□□ -1.04
CDK5RAP1Q96SZ6 NAT10-210ENST00000615292 3329 ntTSL 5 BASIC8.52□□□□□ -1.04
CDK5RAP1Q96SZ6 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC8.52□□□□□ -1.04
CDK5RAP1Q96SZ6 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.04
CDK5RAP1Q96SZ6 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 AC079777.1-201ENST00000623836 1953 ntBASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 ADIPOQ-AS1-201ENST00000422718 3443 ntTSL 5 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 AL161787.1-201ENST00000401543 174 ntBASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 RBMY2YP-201ENST00000423333 912 ntBASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 AC098828.1-201ENST00000436164 440 ntBASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 HIPK1-AS1-203ENST00000441071 571 ntTSL 3 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 RPSAP54-201ENST00000454001 886 ntBASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 CAMTA1-210ENST00000476864 714 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 AP005202.1-202ENST00000583065 748 ntTSL 5 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 AC004477.2-201ENST00000583349 192 ntTSL 3 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 APOC2-202ENST00000585786 880 ntTSL 2 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 APOC2-204ENST00000591597 447 ntTSL 5 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC8.52□□□□□ -1.05
CDK5RAP1Q96SZ6 AL133520.1-201ENST00000610430 700 ntBASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms