Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
P04436 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
P04436 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
P04436 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
P04436 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
P04436 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
P04436 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
P04436 CCNG2-205ENST00000509972 1549 ntTSL 2 BASIC7.44□□□□□ -1.22
P04436 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
P04436 SERPINB12-201ENST00000269491 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
P04436 PSG9-203ENST00000291752 1055 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
P04436 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC7.44□□□□□ -1.22
P04436 RPL3P4-201ENST00000417615 423 ntBASIC7.44□□□□□ -1.22
P04436 YBX1P8-201ENST00000421881 943 ntBASIC7.44□□□□□ -1.22
P04436 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC7.44□□□□□ -1.22
P04436 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC7.44□□□□□ -1.22
P04436 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC7.44□□□□□ -1.22
P04436 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC7.44□□□□□ -1.22
P04436 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC7.44□□□□□ -1.22
P04436 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC7.44□□□□□ -1.22
P04436 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC7.44□□□□□ -1.22
P04436 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC7.44□□□□□ -1.22
P04436 AC117392.1-201ENST00000487061 596 ntBASIC7.44□□□□□ -1.22
P04436 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
P04436 AC023794.3-204ENST00000510754 236 ntBASIC7.44□□□□□ -1.22
P04436 RNA5SP101-201ENST00000517036 108 ntBASIC7.44□□□□□ -1.22
P04436 RPL10P19-201ENST00000519013 301 ntBASIC7.44□□□□□ -1.22
P04436 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC7.44□□□□□ -1.22
P04436 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC7.44□□□□□ -1.22
P04436 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC7.44□□□□□ -1.22
P04436 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC7.44□□□□□ -1.22
P04436 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC7.44□□□□□ -1.22
P04436 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
P04436 MIR3680-2-201ENST00000578247 87 ntBASIC7.44□□□□□ -1.22
P04436 AC090287.1-201ENST00000578374 291 ntBASIC7.44□□□□□ -1.22
P04436 MIR3680-1-201ENST00000581433 87 ntBASIC7.44□□□□□ -1.22
P04436 PROX1-AS1-208ENST00000601335 691 ntTSL 5 BASIC7.44□□□□□ -1.22
P04436 AC005034.2-201ENST00000604464 414 ntBASIC7.44□□□□□ -1.22
P04436 AL731533.2-201ENST00000607898 578 ntBASIC7.44□□□□□ -1.22
P04436 AC090099.1-204ENST00000623626 849 ntBASIC7.44□□□□□ -1.22
P04436 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC7.44□□□□□ -1.22
P04436 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
P04436 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
P04436 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
P04436 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
P04436 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
P04436 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC7.44□□□□□ -1.22
P04436 RAB11A-209ENST00000569896 1396 ntTSL 2 BASIC7.44□□□□□ -1.22
P04436 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
P04436 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
P04436 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC7.43□□□□□ -1.22
P04436 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
P04436 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC7.43□□□□□ -1.22
P04436 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC7.43□□□□□ -1.22
P04436 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
P04436 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
P04436 IL24-202ENST00000367093 1819 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
P04436 OR9M1P-202ENST00000641564 3163 ntBASIC7.43□□□□□ -1.22
P04436 SSBP2-212ENST00000509053 1534 ntTSL 2 BASIC7.43□□□□□ -1.22
P04436 TRIM51EP-201ENST00000524374 1516 ntBASIC7.43□□□□□ -1.22
P04436 TCF4-207ENST00000540999 2572 ntTSL 2 BASIC7.43□□□□□ -1.22
P04436 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC7.43□□□□□ -1.22
P04436 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
P04436 CTNND2-205ENST00000503622 2982 ntTSL 2 BASIC7.43□□□□□ -1.22
P04436 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
P04436 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC7.43□□□□□ -1.22
P04436 AL139274.1-201ENST00000402374 936 ntBASIC7.43□□□□□ -1.22
P04436 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC7.43□□□□□ -1.22
P04436 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC7.43□□□□□ -1.22
P04436 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC7.43□□□□□ -1.22
P04436 AC098828.1-201ENST00000436164 440 ntBASIC7.43□□□□□ -1.22
P04436 RPS13P2-201ENST00000437890 455 ntBASIC7.43□□□□□ -1.22
P04436 AC092447.7-202ENST00000443198 580 ntTSL 2 BASIC7.43□□□□□ -1.22
P04436 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC7.43□□□□□ -1.22
P04436 RPS6P25-201ENST00000464444 748 ntBASIC7.43□□□□□ -1.22
P04436 AC098583.2-201ENST00000504151 372 ntBASIC7.43□□□□□ -1.22
P04436 AC112203.1-201ENST00000506315 1020 ntBASIC7.43□□□□□ -1.22
P04436 AF186996.2-201ENST00000508347 907 ntBASIC7.43□□□□□ -1.22
P04436 GNPDA1-212ENST00000513454 980 ntTSL 5 BASIC7.43□□□□□ -1.22
P04436 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC7.43□□□□□ -1.22
P04436 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC7.43□□□□□ -1.22
P04436 HNF1A-AS1-202ENST00000535301 536 ntTSL 4 BASIC7.43□□□□□ -1.22
P04436 TUBAP4-201ENST00000569261 416 ntBASIC7.43□□□□□ -1.22
P04436 AC009121.1-201ENST00000574681 1095 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
P04436 EIF4A1P9-201ENST00000576035 1207 ntBASIC7.43□□□□□ -1.22
P04436 RN7SL154P-201ENST00000578043 324 ntBASIC7.43□□□□□ -1.22
P04436 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC7.43□□□□□ -1.22
P04436 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC7.43□□□□□ -1.22
P04436 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC7.43□□□□□ -1.22
P04436 MIR8075-201ENST00000614354 80 ntBASIC7.43□□□□□ -1.22
P04436 RN7SL820P-201ENST00000616437 299 ntBASIC7.43□□□□□ -1.22
P04436 AC026336.5-201ENST00000624455 738 ntBASIC7.43□□□□□ -1.22
P04436 AL589666.2-201ENST00000624603 618 ntBASIC7.43□□□□□ -1.22
P04436 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
P04436 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
P04436 OR4P4-202ENST00000641760 2086 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
P04436 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC7.43□□□□□ -1.22
P04436 STK32B-204ENST00000510398 3241 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
P04436 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.43□□□□□ -1.22
P04436 OR51E1-202ENST00000530215 2942 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms