Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 AL513318.2-201ENST00000602579 2012 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SNX18Q96RF0 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNX18Q96RF0 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNX18Q96RF0 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNX18Q96RF0 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNX18Q96RF0 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 AC016251.1-201ENST00000624299 4198 ntBASIC7.54□□□□□ -1.2
SNX18Q96RF0 RNA5SP78-201ENST00000364622 118 ntBASIC7.54□□□□□ -1.2
SNX18Q96RF0 B4GALT6-203ENST00000383131 1239 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SNX18Q96RF0 MAGEC3-202ENST00000409007 1290 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNX18Q96RF0 TMEM139-202ENST00000409102 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNX18Q96RF0 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 RPSAP8-201ENST00000429844 889 ntBASIC7.54□□□□□ -1.2
SNX18Q96RF0 AC007036.1-201ENST00000430537 674 ntTSL 3 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 AC239727.1-201ENST00000431432 623 ntTSL 3 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 C2orf74-203ENST00000432605 887 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 BSNDP4-201ENST00000436076 388 ntBASIC7.54□□□□□ -1.2
SNX18Q96RF0 RN7SL554P-201ENST00000468197 292 ntBASIC7.54□□□□□ -1.2
SNX18Q96RF0 CSTA-202ENST00000479204 821 ntTSL 2 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 AC006153.1-201ENST00000480135 371 ntTSL 3 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 ALG1L12P-201ENST00000515046 434 ntBASIC7.54□□□□□ -1.2
SNX18Q96RF0 MS4A6A-217ENST00000533023 780 ntTSL 3 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 RN7SL670P-201ENST00000577235 294 ntBASIC7.54□□□□□ -1.2
SNX18Q96RF0 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 AC096708.1-201ENST00000584419 658 ntBASIC7.54□□□□□ -1.2
SNX18Q96RF0 SLC6A21P-201ENST00000599458 369 ntBASIC7.54□□□□□ -1.2
SNX18Q96RF0 AL139220.2-211ENST00000628234 754 ntTSL 5 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SNX18Q96RF0 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNX18Q96RF0 AL512504.2-201ENST00000445455 1909 ntBASIC7.54□□□□□ -1.2
SNX18Q96RF0 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNX18Q96RF0 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNX18Q96RF0 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNX18Q96RF0 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNX18Q96RF0 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SNX18Q96RF0 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 TRHR-201ENST00000311762 1415 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SNX18Q96RF0 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SNX18Q96RF0 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.53□□□□□ -1.2
SNX18Q96RF0 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SNX18Q96RF0 ARHGDIB-201ENST00000228945 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SNX18Q96RF0 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SNX18Q96RF0 SCNM1-201ENST00000368902 869 ntTSL 2 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 MIR637-201ENST00000385000 99 ntBASIC7.53□□□□□ -1.2
SNX18Q96RF0 SNORD86-201ENST00000391196 86 ntBASIC7.53□□□□□ -1.2
SNX18Q96RF0 CRYGS-202ENST00000392499 1132 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 LYPLA2P3-201ENST00000417429 576 ntBASIC7.53□□□□□ -1.2
SNX18Q96RF0 RFESDP1-201ENST00000422350 461 ntBASIC7.53□□□□□ -1.2
SNX18Q96RF0 MT1G-202ENST00000444837 406 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
SNX18Q96RF0 FAR2P3-205ENST00000447059 604 ntBASIC7.53□□□□□ -1.2
SNX18Q96RF0 NDUFB11P1-201ENST00000455818 465 ntBASIC7.53□□□□□ -1.2
SNX18Q96RF0 AF186996.8-201ENST00000463158 907 ntBASIC7.53□□□□□ -1.2
SNX18Q96RF0 AC002384.1-202ENST00000470135 673 ntTSL 5 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 AC016546.1-201ENST00000473590 463 ntBASIC7.53□□□□□ -1.2
SNX18Q96RF0 RN7SL569P-201ENST00000494652 288 ntBASIC7.53□□□□□ -1.2
SNX18Q96RF0 CFL1P5-201ENST00000508046 502 ntBASIC7.53□□□□□ -1.2
SNX18Q96RF0 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 AC103770.1-201ENST00000517884 833 ntTSL 3 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 AP000873.4-201ENST00000528133 905 ntTSL 3 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 AC006206.2-201ENST00000537192 992 ntTSL 4 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 TRAV11-201ENST00000539512 339 ntBASIC7.53□□□□□ -1.2
SNX18Q96RF0 TAS2R38-201ENST00000547270 1143 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 AC089998.4-201ENST00000552532 459 ntTSL 3 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 AC090213.1-201ENST00000586841 546 ntTSL 4 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 AC008622.1-201ENST00000597106 284 ntBASIC7.53□□□□□ -1.2
SNX18Q96RF0 AC090950.1-201ENST00000604625 830 ntBASIC7.53□□□□□ -1.2
SNX18Q96RF0 AC009053.4-201ENST00000614366 108 ntBASIC7.53□□□□□ -1.2
SNX18Q96RF0 ADD3-AS1-203ENST00000625954 472 ntTSL 3 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 CPSF7-226ENST00000626926 306 ntTSL 5 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 TMEM136-204ENST00000529187 3930 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SNX18Q96RF0 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SNX18Q96RF0 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
SNX18Q96RF0 MOSPD1-203ENST00000370783 2364 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SNX18Q96RF0 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SNX18Q96RF0 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SNX18Q96RF0 HCG18-244ENST00000602516 2890 ntBASIC7.53□□□□□ -1.2
SNX18Q96RF0 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SNX18Q96RF0 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SNX18Q96RF0 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.53□□□□□ -1.2
SNX18Q96RF0 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SNX18Q96RF0 PACRG-AS2-201ENST00000418665 1300 ntTSL 2 BASIC7.52□□□□□ -1.2
SNX18Q96RF0 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
SNX18Q96RF0 AP003119.3-201ENST00000566747 4192 ntBASIC7.52□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms