Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 GYG1P2-201ENST00000426437 1006 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 ASS1P5-201ENST00000435496 1239 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 FABP5P10-201ENST00000435729 408 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AC012494.1-201ENST00000439259 1103 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AC092569.1-201ENST00000455192 258 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AL109809.3-201ENST00000456875 246 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AC068042.1-201ENST00000482222 1148 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AC023794.3-204ENST00000510754 236 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 IGHVII-26-2-201ENST00000518751 325 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 PPP1R1AP1-201ENST00000525622 425 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 RNF185-AS1-201ENST00000526089 353 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AC138123.3-201ENST00000551928 791 ntTSL 5 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AC005230.1-201ENST00000555418 285 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AC104046.1-201ENST00000559487 406 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 TUBAP4-201ENST00000569261 416 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 BX649601.1-201ENST00000608264 572 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AC016876.3-201ENST00000610459 426 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AC138904.2-201ENST00000614412 107 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AL669830.1-201ENST00000621457 656 ntBASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AC097662.1-204ENST00000396588 2214 ntTSL 2 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 GC-208ENST00000513476 1567 ntTSL 5 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.49□□□□□ -1.21
NPIPA3F8WFD2 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 AL512504.2-201ENST00000445455 1909 ntBASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 INPP5B-205ENST00000373027 3905 ntTSL 2 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 IDI2-201ENST00000277517 1359 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 ZNF192P2-201ENST00000402215 1383 ntBASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 THG1L-201ENST00000231198 3107 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 AL049833.3-201ENST00000623920 3738 ntBASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 RN7SKP76-201ENST00000364419 323 ntBASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 AL138807.1-201ENST00000400354 459 ntBASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 AL022332.1-201ENST00000411511 428 ntTSL 5 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 RPL21P88-201ENST00000436649 436 ntBASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 LINC01284-201ENST00000442994 730 ntTSL 5 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 RN7SL241P-201ENST00000482973 236 ntBASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 AC114812.3-201ENST00000509542 730 ntBASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 RNU7-179P-201ENST00000516608 68 ntBASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 AC022695.2-201ENST00000518042 768 ntTSL 3 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 AP002957.1-201ENST00000525952 406 ntTSL 3 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 OR51E1-202ENST00000530215 2942 ntBASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 TBC1D21-202ENST00000535547 1005 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 AC233290.2-201ENST00000552852 390 ntBASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms