Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 RPE-216ENST00000454822 2130 ntTSL 2 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 WISP3-204ENST00000368666 2700 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 ENPP6-201ENST00000296741 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 AKAP2-201ENST00000259318 3101 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 FAM13C-217ENST00000618804 3333 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 CNDP1-203ENST00000582365 4111 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 AC004158.1-202ENST00000624327 1645 ntTSL 2 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 KAT6A-208ENST00000485568 3592 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 TAAR2-201ENST00000275191 1157 ntAPPRIS P3 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 TREM1-202ENST00000334475 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 MIR431-201ENST00000385266 114 ntBASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 AL161787.1-201ENST00000401543 174 ntBASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 AC008155.1-201ENST00000421078 329 ntBASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 LINC00379-202ENST00000438789 464 ntTSL 3 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 AC097358.1-201ENST00000438827 582 ntBASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 RN7SL464P-201ENST00000492743 297 ntBASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 AC026444.1-201ENST00000502592 496 ntBASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 SLC25A14P1-201ENST00000502867 901 ntBASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 AC008638.2-201ENST00000503840 715 ntBASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 C14orf159-210ENST00000518665 959 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 AC090193.2-201ENST00000518970 537 ntTSL 4 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 IGHVIII-82-201ENST00000522058 250 ntBASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 SDR16C6P-202ENST00000524136 955 ntBASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 AC027544.1-201ENST00000538408 433 ntBASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 AL358394.3-202ENST00000599308 832 ntTSL 5 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 AC005034.2-201ENST00000604464 414 ntBASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 AC106782.6-201ENST00000611264 512 ntBASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 AC008870.1-201ENST00000566996 3009 ntTSL 2 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 CPNE4-210ENST00000512332 2230 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 CCDC174-202ENST00000383794 2942 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 TRIM49D1-202ENST00000530311 2164 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 GPR1-210ENST00000621141 2156 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 CCDC190-203ENST00000367912 2605 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 DIAPH3-202ENST00000377908 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 CDRT1-203ENST00000395667 3016 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
SYCE2Q6PIF2 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 LEAP2-201ENST00000296877 2207 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 CNTNAP4-202ENST00000377504 4723 ntTSL 5 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 RPSAP44-201ENST00000406712 884 ntBASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 SNRPE-202ENST00000414487 942 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 AC010740.1-201ENST00000417035 684 ntBASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 OR52U1P-201ENST00000439752 923 ntBASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 YWHABP1-201ENST00000445359 727 ntBASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 AC004801.2-201ENST00000468202 779 ntBASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 AF279873.2-201ENST00000468681 744 ntBASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 AC020636.1-201ENST00000469268 565 ntTSL 4 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 AC079944.1-201ENST00000485426 495 ntBASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 AC134698.1-201ENST00000511619 643 ntBASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 AC103855.4-201ENST00000533158 265 ntBASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 SLC25A3P2-201ENST00000547720 880 ntBASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 AL031118.1-201ENST00000607727 2955 ntBASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SYCE2Q6PIF2 ERG-210ENST00000442448 5034 ntTSL 5 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms