Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 AC027702.1-201ENST00000563810 1770 ntBASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HRH3Q9Y5N1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HRH3Q9Y5N1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HRH3Q9Y5N1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HRH3Q9Y5N1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HRH3Q9Y5N1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.66■□□□□ 0.58
HRH3Q9Y5N1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.66■□□□□ 0.58
HRH3Q9Y5N1 MCRIP2P1-201ENST00000394346 511 ntBASIC18.66■□□□□ 0.58
HRH3Q9Y5N1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.66■□□□□ 0.58
HRH3Q9Y5N1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HRH3Q9Y5N1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.66■□□□□ 0.58
HRH3Q9Y5N1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HRH3Q9Y5N1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.66■□□□□ 0.58
HRH3Q9Y5N1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HRH3Q9Y5N1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HRH3Q9Y5N1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HRH3Q9Y5N1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HRH3Q9Y5N1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
HRH3Q9Y5N1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HRH3Q9Y5N1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 ESRRAP1-201ENST00000400596 1257 ntBASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 AC100791.3-201ENST00000617619 330 ntBASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
HRH3Q9Y5N1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms