Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC121338.2-201ENST00000622535 1744 ntBASIC19.03■□□□□ 0.64
RNF6Q9Y252 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
RNF6Q9Y252 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF6Q9Y252 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF6Q9Y252 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF6Q9Y252 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
RNF6Q9Y252 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF6Q9Y252 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF6Q9Y252 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF6Q9Y252 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF6Q9Y252 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF6Q9Y252 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF6Q9Y252 SLC7A5P2-201ENST00000553010 536 ntBASIC19.02■□□□□ 0.64
RNF6Q9Y252 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF6Q9Y252 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.02■□□□□ 0.64
RNF6Q9Y252 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF6Q9Y252 TMEM191A-211ENST00000637163 1067 ntBASIC19.02■□□□□ 0.64
RNF6Q9Y252 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF6Q9Y252 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF6Q9Y252 AC007225.1-201ENST00000566331 1836 ntBASIC19.02■□□□□ 0.63
RNF6Q9Y252 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF6Q9Y252 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF6Q9Y252 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF6Q9Y252 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF6Q9Y252 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF6Q9Y252 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF6Q9Y252 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF6Q9Y252 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF6Q9Y252 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF6Q9Y252 AC112907.3-201ENST00000577781 2400 ntBASIC19.01■□□□□ 0.63
RNF6Q9Y252 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF6Q9Y252 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF6Q9Y252 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF6Q9Y252 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF6Q9Y252 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF6Q9Y252 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF6Q9Y252 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF6Q9Y252 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF6Q9Y252 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF6Q9Y252 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF6Q9Y252 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RNF6Q9Y252 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF6Q9Y252 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
RNF6Q9Y252 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF6Q9Y252 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF6Q9Y252 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RNF6Q9Y252 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF6Q9Y252 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF6Q9Y252 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19■□□□□ 0.63
RNF6Q9Y252 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19■□□□□ 0.63
RNF6Q9Y252 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF6Q9Y252 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF6Q9Y252 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19■□□□□ 0.63
RNF6Q9Y252 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RNF6Q9Y252 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF6Q9Y252 SLC29A4P1-201ENST00000398760 971 ntBASIC19■□□□□ 0.63
RNF6Q9Y252 GUSBP6-202ENST00000438529 1198 ntBASIC19■□□□□ 0.63
RNF6Q9Y252 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF6Q9Y252 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF6Q9Y252 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF6Q9Y252 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF6Q9Y252 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19■□□□□ 0.63
RNF6Q9Y252 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF6Q9Y252 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RNF6Q9Y252 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF6Q9Y252 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF6Q9Y252 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF6Q9Y252 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF6Q9Y252 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF6Q9Y252 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF6Q9Y252 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF6Q9Y252 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF6Q9Y252 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF6Q9Y252 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF6Q9Y252 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF6Q9Y252 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF6Q9Y252 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF6Q9Y252 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF6Q9Y252 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF6Q9Y252 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RNF6Q9Y252 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RNF6Q9Y252 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF6Q9Y252 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF6Q9Y252 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF6Q9Y252 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF6Q9Y252 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF6Q9Y252 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF6Q9Y252 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF6Q9Y252 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF6Q9Y252 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF6Q9Y252 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF6Q9Y252 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF6Q9Y252 AC010141.2-201ENST00000452426 721 ntBASIC18.98■□□□□ 0.63
RNF6Q9Y252 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RNF6Q9Y252 AL138781.1-201ENST00000566567 1274 ntBASIC18.98■□□□□ 0.63
RNF6Q9Y252 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.98■□□□□ 0.63
RNF6Q9Y252 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF6Q9Y252 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF6Q9Y252 AP006587.3-201ENST00000525742 1516 ntBASIC18.98■□□□□ 0.63
RNF6Q9Y252 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms