Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COPS3Q9UNS2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.02■□□□□ 0.48
COPS3Q9UNS2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COPS3Q9UNS2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
COPS3Q9UNS2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
COPS3Q9UNS2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COPS3Q9UNS2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
COPS3Q9UNS2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.02■□□□□ 0.47
COPS3Q9UNS2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
COPS3Q9UNS2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.02■□□□□ 0.47
COPS3Q9UNS2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
COPS3Q9UNS2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COPS3Q9UNS2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 AC105265.2-201ENST00000467189 838 ntBASIC18.01■□□□□ 0.47
COPS3Q9UNS2 DUX4L2-201ENST00000561772 1275 ntBASIC18.01■□□□□ 0.47
COPS3Q9UNS2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 DUX4L6-201ENST00000626483 1275 ntBASIC18.01■□□□□ 0.47
COPS3Q9UNS2 DUX4L1-201ENST00000627662 1275 ntBASIC18.01■□□□□ 0.47
COPS3Q9UNS2 DUX4L8-201ENST00000629013 1275 ntBASIC18.01■□□□□ 0.47
COPS3Q9UNS2 DUX4L3-201ENST00000630187 1275 ntBASIC18.01■□□□□ 0.47
COPS3Q9UNS2 DUX4L7-201ENST00000630678 1275 ntBASIC18.01■□□□□ 0.47
COPS3Q9UNS2 DUX4L5-201ENST00000630834 1275 ntBASIC18.01■□□□□ 0.47
COPS3Q9UNS2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 AC125437.2-201ENST00000625180 2167 ntBASIC18.01■□□□□ 0.47
COPS3Q9UNS2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COPS3Q9UNS2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18■□□□□ 0.47
COPS3Q9UNS2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
COPS3Q9UNS2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18■□□□□ 0.47
COPS3Q9UNS2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18■□□□□ 0.47
COPS3Q9UNS2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COPS3Q9UNS2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
COPS3Q9UNS2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18■□□□□ 0.47
COPS3Q9UNS2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COPS3Q9UNS2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18■□□□□ 0.47
COPS3Q9UNS2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18■□□□□ 0.47
COPS3Q9UNS2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18■□□□□ 0.47
COPS3Q9UNS2 AP001160.3-201ENST00000601484 763 ntBASIC18■□□□□ 0.47
COPS3Q9UNS2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18■□□□□ 0.47
COPS3Q9UNS2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
COPS3Q9UNS2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COPS3Q9UNS2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18■□□□□ 0.47
COPS3Q9UNS2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COPS3Q9UNS2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18■□□□□ 0.47
COPS3Q9UNS2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COPS3Q9UNS2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms