Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CAPN11Q9UMQ6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CAPN11Q9UMQ6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.9■■□□□ 1.1
CAPN11Q9UMQ6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CAPN11Q9UMQ6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CAPN11Q9UMQ6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.9■■□□□ 1.1
CAPN11Q9UMQ6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CAPN11Q9UMQ6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.9■■□□□ 1.1
CAPN11Q9UMQ6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CAPN11Q9UMQ6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CAPN11Q9UMQ6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CAPN11Q9UMQ6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CAPN11Q9UMQ6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CAPN11Q9UMQ6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
CAPN11Q9UMQ6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CAPN11Q9UMQ6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CAPN11Q9UMQ6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CAPN11Q9UMQ6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CAPN11Q9UMQ6 AC019069.1-201ENST00000610008 1333 ntBASIC21.89■■□□□ 1.1
CAPN11Q9UMQ6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CAPN11Q9UMQ6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CAPN11Q9UMQ6 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.89■■□□□ 1.09
CAPN11Q9UMQ6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.89■■□□□ 1.09
CAPN11Q9UMQ6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.89■■□□□ 1.09
CAPN11Q9UMQ6 FAM21FP-204ENST00000608637 956 ntBASIC21.89■■□□□ 1.09
CAPN11Q9UMQ6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CAPN11Q9UMQ6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CAPN11Q9UMQ6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CAPN11Q9UMQ6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN11Q9UMQ6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN11Q9UMQ6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN11Q9UMQ6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.88■■□□□ 1.09
CAPN11Q9UMQ6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN11Q9UMQ6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN11Q9UMQ6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN11Q9UMQ6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN11Q9UMQ6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.88■■□□□ 1.09
CAPN11Q9UMQ6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN11Q9UMQ6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CAPN11Q9UMQ6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.88■■□□□ 1.09
CAPN11Q9UMQ6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CAPN11Q9UMQ6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.88■■□□□ 1.09
CAPN11Q9UMQ6 AC004854.2-201ENST00000608450 1441 ntBASIC21.88■■□□□ 1.09
CAPN11Q9UMQ6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.88■■□□□ 1.09
CAPN11Q9UMQ6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.87■■□□□ 1.09
CAPN11Q9UMQ6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 YBX1P1-201ENST00000445822 960 ntBASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CAPN11Q9UMQ6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms