Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SIX4Q9UIU6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SIX4Q9UIU6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SIX4Q9UIU6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIX4Q9UIU6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.73■■□□□ 1.07
SIX4Q9UIU6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIX4Q9UIU6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIX4Q9UIU6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 AC092720.2-201ENST00000602388 1665 ntBASIC21.72■■□□□ 1.07
SIX4Q9UIU6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 PNMA6B-201ENST00000538162 1200 ntBASIC21.72■■□□□ 1.07
SIX4Q9UIU6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIX4Q9UIU6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SIX4Q9UIU6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIX4Q9UIU6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.71■■□□□ 1.07
SIX4Q9UIU6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SIX4Q9UIU6 AC092368.3-202ENST00000574180 1591 ntBASIC21.71■■□□□ 1.07
SIX4Q9UIU6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SIX4Q9UIU6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIX4Q9UIU6 FEM1AP1-201ENST00000431297 1995 ntBASIC21.71■■□□□ 1.07
SIX4Q9UIU6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIX4Q9UIU6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.71■■□□□ 1.07
SIX4Q9UIU6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.71■■□□□ 1.07
SIX4Q9UIU6 UNC93B5-201ENST00000530315 699 ntBASIC21.71■■□□□ 1.07
SIX4Q9UIU6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.71■■□□□ 1.07
SIX4Q9UIU6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIX4Q9UIU6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SIX4Q9UIU6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SIX4Q9UIU6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIX4Q9UIU6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SIX4Q9UIU6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIX4Q9UIU6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIX4Q9UIU6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SIX4Q9UIU6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SIX4Q9UIU6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIX4Q9UIU6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIX4Q9UIU6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.7■■□□□ 1.06
SIX4Q9UIU6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.7■■□□□ 1.06
SIX4Q9UIU6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIX4Q9UIU6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.7■■□□□ 1.06
SIX4Q9UIU6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.7■■□□□ 1.06
SIX4Q9UIU6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
SIX4Q9UIU6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.7■■□□□ 1.06
SIX4Q9UIU6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.7■■□□□ 1.06
SIX4Q9UIU6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SIX4Q9UIU6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SIX4Q9UIU6 AP005212.1-201ENST00000581547 1997 ntBASIC21.7■■□□□ 1.06
SIX4Q9UIU6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIX4Q9UIU6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.7■■□□□ 1.06
SIX4Q9UIU6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 TSPY20P-201ENST00000450910 630 ntBASIC21.69■■□□□ 1.06
SIX4Q9UIU6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 DPP3P2-201ENST00000416030 1696 ntBASIC21.69■■□□□ 1.06
SIX4Q9UIU6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.69■■□□□ 1.06
SIX4Q9UIU6 AC020907.5-201ENST00000624372 1936 ntBASIC21.68■■□□□ 1.06
SIX4Q9UIU6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIX4Q9UIU6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIX4Q9UIU6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIX4Q9UIU6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.68■■□□□ 1.06
SIX4Q9UIU6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.68■■□□□ 1.06
SIX4Q9UIU6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
SIX4Q9UIU6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
SIX4Q9UIU6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.68■■□□□ 1.06
SIX4Q9UIU6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIX4Q9UIU6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SIX4Q9UIU6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SIX4Q9UIU6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.68■■□□□ 1.06
SIX4Q9UIU6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms