Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPSF2Q9P2I0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPSF2Q9P2I0 KRT87P-202ENST00000534226 1464 ntBASIC20.33■□□□□ 0.85
CPSF2Q9P2I0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CPSF2Q9P2I0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CPSF2Q9P2I0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPSF2Q9P2I0 AC105265.2-201ENST00000467189 838 ntBASIC20.33■□□□□ 0.85
CPSF2Q9P2I0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.33■□□□□ 0.85
CPSF2Q9P2I0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.85
CPSF2Q9P2I0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.33■□□□□ 0.85
CPSF2Q9P2I0 AC008175.2-201ENST00000612840 297 ntBASIC20.33■□□□□ 0.85
CPSF2Q9P2I0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CPSF2Q9P2I0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPSF2Q9P2I0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.33■□□□□ 0.84
CPSF2Q9P2I0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPSF2Q9P2I0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 AL162377.1-201ENST00000618844 1793 ntBASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 IRS3P-201ENST00000223076 1006 ntBASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 AC005837.3-201ENST00000612163 286 ntBASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.31■□□□□ 0.84
CPSF2Q9P2I0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPSF2Q9P2I0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPSF2Q9P2I0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPSF2Q9P2I0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CPSF2Q9P2I0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.3■□□□□ 0.84
CPSF2Q9P2I0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.3■□□□□ 0.84
CPSF2Q9P2I0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.3■□□□□ 0.84
CPSF2Q9P2I0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.3■□□□□ 0.84
CPSF2Q9P2I0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.3■□□□□ 0.84
CPSF2Q9P2I0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CPSF2Q9P2I0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPSF2Q9P2I0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPSF2Q9P2I0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPSF2Q9P2I0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPSF2Q9P2I0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CPSF2Q9P2I0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPSF2Q9P2I0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPSF2Q9P2I0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPSF2Q9P2I0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPSF2Q9P2I0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPSF2Q9P2I0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPSF2Q9P2I0 POU5F1P4-201ENST00000413175 1085 ntBASIC20.29■□□□□ 0.84
CPSF2Q9P2I0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CPSF2Q9P2I0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPSF2Q9P2I0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CPSF2Q9P2I0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPSF2Q9P2I0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPSF2Q9P2I0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPSF2Q9P2I0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.29■□□□□ 0.84
CPSF2Q9P2I0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.29■□□□□ 0.84
CPSF2Q9P2I0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms