Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 AL162430.1-201ENST00000480705 870 ntBASIC18.8■□□□□ 0.6
POLE3Q9NRF9 DUX4L16-201ENST00000555130 1264 ntBASIC18.8■□□□□ 0.6
POLE3Q9NRF9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 AC100791.3-201ENST00000617619 330 ntBASIC18.8■□□□□ 0.6
POLE3Q9NRF9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLE3Q9NRF9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 AC011767.1-201ENST00000617410 1153 ntBASIC18.78■□□□□ 0.6
POLE3Q9NRF9 BID-214ENST00000617586 542 ntTSL 5 BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLE3Q9NRF9 CYP21A1P-202ENST00000354927 1481 ntBASIC18.77■□□□□ 0.6
POLE3Q9NRF9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 CNN2P6-201ENST00000439038 900 ntBASIC18.77■□□□□ 0.6
POLE3Q9NRF9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 AL356652.1-201ENST00000615962 565 ntBASIC18.77■□□□□ 0.6
POLE3Q9NRF9 AC231657.2-201ENST00000624556 255 ntBASIC18.77■□□□□ 0.6
POLE3Q9NRF9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
POLE3Q9NRF9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLE3Q9NRF9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLE3Q9NRF9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
POLE3Q9NRF9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLE3Q9NRF9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
POLE3Q9NRF9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLE3Q9NRF9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
POLE3Q9NRF9 AL512408.1-201ENST00000569378 2000 ntBASIC18.76■□□□□ 0.59
POLE3Q9NRF9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLE3Q9NRF9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLE3Q9NRF9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLE3Q9NRF9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLE3Q9NRF9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLE3Q9NRF9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms