Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GCM1Q9NP62 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GCM1Q9NP62 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.28■□□□□ 0.36
GCM1Q9NP62 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GCM1Q9NP62 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.28■□□□□ 0.36
GCM1Q9NP62 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
GCM1Q9NP62 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.28■□□□□ 0.36
GCM1Q9NP62 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.28■□□□□ 0.36
GCM1Q9NP62 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GCM1Q9NP62 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GCM1Q9NP62 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GCM1Q9NP62 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GCM1Q9NP62 PGM5P4-201ENST00000421970 445 ntBASIC17.28■□□□□ 0.36
GCM1Q9NP62 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.28■□□□□ 0.36
GCM1Q9NP62 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.28■□□□□ 0.36
GCM1Q9NP62 AC142086.2-201ENST00000569753 217 ntBASIC17.28■□□□□ 0.36
GCM1Q9NP62 MIR4758-201ENST00000577688 71 ntBASIC17.28■□□□□ 0.36
GCM1Q9NP62 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.28■□□□□ 0.36
GCM1Q9NP62 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.28■□□□□ 0.36
GCM1Q9NP62 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GCM1Q9NP62 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.28■□□□□ 0.36
GCM1Q9NP62 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GCM1Q9NP62 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GCM1Q9NP62 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
GCM1Q9NP62 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GCM1Q9NP62 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GCM1Q9NP62 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
GCM1Q9NP62 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GCM1Q9NP62 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.27■□□□□ 0.36
GCM1Q9NP62 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GCM1Q9NP62 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GCM1Q9NP62 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.27■□□□□ 0.36
GCM1Q9NP62 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
GCM1Q9NP62 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GCM1Q9NP62 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.27■□□□□ 0.36
GCM1Q9NP62 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.27■□□□□ 0.36
GCM1Q9NP62 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GCM1Q9NP62 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.27■□□□□ 0.36
GCM1Q9NP62 LSM12P1-201ENST00000411836 588 ntBASIC17.27■□□□□ 0.36
GCM1Q9NP62 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
GCM1Q9NP62 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.27■□□□□ 0.36
GCM1Q9NP62 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.27■□□□□ 0.36
GCM1Q9NP62 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.27■□□□□ 0.36
GCM1Q9NP62 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.27■□□□□ 0.36
GCM1Q9NP62 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.27■□□□□ 0.36
GCM1Q9NP62 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.27■□□□□ 0.36
GCM1Q9NP62 AL589743.5-201ENST00000616611 1050 ntBASIC17.27■□□□□ 0.36
GCM1Q9NP62 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
GCM1Q9NP62 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.27■□□□□ 0.35
GCM1Q9NP62 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GCM1Q9NP62 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
GCM1Q9NP62 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GCM1Q9NP62 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GCM1Q9NP62 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.27■□□□□ 0.35
GCM1Q9NP62 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GCM1Q9NP62 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.26■□□□□ 0.35
GCM1Q9NP62 KRT17P1-201ENST00000399211 1546 ntBASIC17.26■□□□□ 0.35
GCM1Q9NP62 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GCM1Q9NP62 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GCM1Q9NP62 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GCM1Q9NP62 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.26■□□□□ 0.35
GCM1Q9NP62 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GCM1Q9NP62 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.26■□□□□ 0.35
GCM1Q9NP62 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GCM1Q9NP62 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GCM1Q9NP62 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GCM1Q9NP62 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GCM1Q9NP62 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.26■□□□□ 0.35
GCM1Q9NP62 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
GCM1Q9NP62 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GCM1Q9NP62 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.26■□□□□ 0.35
GCM1Q9NP62 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.26■□□□□ 0.35
GCM1Q9NP62 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.26■□□□□ 0.35
GCM1Q9NP62 AC092118.2-201ENST00000613495 667 ntBASIC17.26■□□□□ 0.35
GCM1Q9NP62 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GCM1Q9NP62 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.26■□□□□ 0.35
GCM1Q9NP62 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GCM1Q9NP62 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GCM1Q9NP62 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
GCM1Q9NP62 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GCM1Q9NP62 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GCM1Q9NP62 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.26■□□□□ 0.35
GCM1Q9NP62 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
GCM1Q9NP62 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCM1Q9NP62 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GCM1Q9NP62 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
GCM1Q9NP62 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GCM1Q9NP62 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCM1Q9NP62 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
GCM1Q9NP62 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCM1Q9NP62 AC073210.2-201ENST00000430369 194 ntBASIC17.25■□□□□ 0.35
GCM1Q9NP62 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.25■□□□□ 0.35
GCM1Q9NP62 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
GCM1Q9NP62 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCM1Q9NP62 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.25■□□□□ 0.35
GCM1Q9NP62 MIR2861-201ENST00000636310 90 ntBASIC17.25■□□□□ 0.35
GCM1Q9NP62 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCM1Q9NP62 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.25■□□□□ 0.35
GCM1Q9NP62 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GCM1Q9NP62 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms