Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 MIR2861-201ENST00000636310 90 ntBASIC23.68■■□□□ 1.38
SH2D4AQ9H788 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SH2D4AQ9H788 KRT8P36-201ENST00000489121 1440 ntBASIC23.67■■□□□ 1.38
SH2D4AQ9H788 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.67■■□□□ 1.38
SH2D4AQ9H788 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 MTDHP1-201ENST00000605323 784 ntBASIC23.66■■□□□ 1.38
SH2D4AQ9H788 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SH2D4AQ9H788 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH2D4AQ9H788 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH2D4AQ9H788 AC121338.2-201ENST00000622535 1744 ntBASIC23.65■■□□□ 1.38
SH2D4AQ9H788 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
SH2D4AQ9H788 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SH2D4AQ9H788 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH2D4AQ9H788 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SH2D4AQ9H788 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SH2D4AQ9H788 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SH2D4AQ9H788 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH2D4AQ9H788 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SH2D4AQ9H788 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.65■■□□□ 1.38
SH2D4AQ9H788 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.65■■□□□ 1.38
SH2D4AQ9H788 AL596275.1-201ENST00000423464 877 ntBASIC23.65■■□□□ 1.38
SH2D4AQ9H788 AC023632.3-201ENST00000521633 145 ntBASIC23.65■■□□□ 1.38
SH2D4AQ9H788 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH2D4AQ9H788 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SH2D4AQ9H788 AL024507.2-201ENST00000606070 2574 ntBASIC23.65■■□□□ 1.38
SH2D4AQ9H788 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH2D4AQ9H788 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SH2D4AQ9H788 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH2D4AQ9H788 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH2D4AQ9H788 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
SH2D4AQ9H788 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH2D4AQ9H788 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH2D4AQ9H788 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH2D4AQ9H788 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.38
SH2D4AQ9H788 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
SH2D4AQ9H788 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.38
SH2D4AQ9H788 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SH2D4AQ9H788 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.64■■□□□ 1.38
SH2D4AQ9H788 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
SH2D4AQ9H788 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.64■■□□□ 1.38
SH2D4AQ9H788 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SH2D4AQ9H788 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SH2D4AQ9H788 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
SH2D4AQ9H788 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.64■■□□□ 1.37
SH2D4AQ9H788 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.64■■□□□ 1.37
SH2D4AQ9H788 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.64■■□□□ 1.37
SH2D4AQ9H788 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.64■■□□□ 1.37
SH2D4AQ9H788 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms