Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PTPN23Q9H3S7 AC124283.5-201ENST00000624661 1809 ntBASIC30.77■■■□□ 2.52
PTPN23Q9H3S7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
PTPN23Q9H3S7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PTPN23Q9H3S7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
PTPN23Q9H3S7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
PTPN23Q9H3S7 AL390719.1-204ENST00000412397 1219 ntBASIC30.76■■■□□ 2.52
PTPN23Q9H3S7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
PTPN23Q9H3S7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
PTPN23Q9H3S7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC30.76■■■□□ 2.52
PTPN23Q9H3S7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
PTPN23Q9H3S7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC30.76■■■□□ 2.52
PTPN23Q9H3S7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
PTPN23Q9H3S7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
PTPN23Q9H3S7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC30.76■■■□□ 2.52
PTPN23Q9H3S7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC30.76■■■□□ 2.52
PTPN23Q9H3S7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
PTPN23Q9H3S7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC30.76■■■□□ 2.51
PTPN23Q9H3S7 AL121603.2-201ENST00000557373 2117 ntBASIC30.76■■■□□ 2.51
PTPN23Q9H3S7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
PTPN23Q9H3S7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC30.76■■■□□ 2.51
PTPN23Q9H3S7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PTPN23Q9H3S7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC30.76■■■□□ 2.51
PTPN23Q9H3S7 PLK5-205ENST00000642079 1969 ntBASIC30.76■■■□□ 2.51
PTPN23Q9H3S7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
PTPN23Q9H3S7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC30.75■■■□□ 2.51
PTPN23Q9H3S7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PTPN23Q9H3S7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC30.75■■■□□ 2.51
PTPN23Q9H3S7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PTPN23Q9H3S7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
PTPN23Q9H3S7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC30.75■■■□□ 2.51
PTPN23Q9H3S7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PTPN23Q9H3S7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PTPN23Q9H3S7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PTPN23Q9H3S7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PTPN23Q9H3S7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC30.74■■■□□ 2.51
PTPN23Q9H3S7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PTPN23Q9H3S7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PTPN23Q9H3S7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
PTPN23Q9H3S7 KRASP1-201ENST00000407852 552 ntBASIC30.74■■■□□ 2.51
PTPN23Q9H3S7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC30.74■■■□□ 2.51
PTPN23Q9H3S7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
PTPN23Q9H3S7 Six3os1_6.1-201ENST00000620790 196 ntBASIC30.74■■■□□ 2.51
PTPN23Q9H3S7 AL023875.1-201ENST00000640777 796 ntBASIC30.74■■■□□ 2.51
PTPN23Q9H3S7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
PTPN23Q9H3S7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PTPN23Q9H3S7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC30.74■■■□□ 2.51
PTPN23Q9H3S7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PTPN23Q9H3S7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PTPN23Q9H3S7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC30.73■■■□□ 2.51
PTPN23Q9H3S7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC30.73■■■□□ 2.51
PTPN23Q9H3S7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC30.73■■■□□ 2.51
PTPN23Q9H3S7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
PTPN23Q9H3S7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PTPN23Q9H3S7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PTPN23Q9H3S7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC30.73■■■□□ 2.51
PTPN23Q9H3S7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC30.73■■■□□ 2.51
PTPN23Q9H3S7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PTPN23Q9H3S7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC30.73■■■□□ 2.51
PTPN23Q9H3S7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC30.73■■■□□ 2.51
PTPN23Q9H3S7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC30.73■■■□□ 2.51
PTPN23Q9H3S7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PTPN23Q9H3S7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PTPN23Q9H3S7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PTPN23Q9H3S7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC30.72■■■□□ 2.51
PTPN23Q9H3S7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC30.72■■■□□ 2.51
PTPN23Q9H3S7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC30.72■■■□□ 2.51
PTPN23Q9H3S7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC30.72■■■□□ 2.51
PTPN23Q9H3S7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
PTPN23Q9H3S7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PTPN23Q9H3S7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PTPN23Q9H3S7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PTPN23Q9H3S7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
PTPN23Q9H3S7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
PTPN23Q9H3S7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PTPN23Q9H3S7 AC026310.3-201ENST00000625186 2373 ntBASIC30.71■■■□□ 2.51
PTPN23Q9H3S7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PTPN23Q9H3S7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC30.71■■■□□ 2.51
PTPN23Q9H3S7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PTPN23Q9H3S7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC30.71■■■□□ 2.51
PTPN23Q9H3S7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC30.71■■■□□ 2.51
PTPN23Q9H3S7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PTPN23Q9H3S7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PTPN23Q9H3S7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
PTPN23Q9H3S7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PTPN23Q9H3S7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC30.7■■■□□ 2.51
PTPN23Q9H3S7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC30.7■■■□□ 2.51
PTPN23Q9H3S7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC30.7■■■□□ 2.5
PTPN23Q9H3S7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
PTPN23Q9H3S7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC30.69■■■□□ 2.5
PTPN23Q9H3S7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC30.69■■■□□ 2.5
PTPN23Q9H3S7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC30.69■■■□□ 2.5
PTPN23Q9H3S7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC30.69■■■□□ 2.5
PTPN23Q9H3S7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PTPN23Q9H3S7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PTPN23Q9H3S7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PTPN23Q9H3S7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC30.69■■■□□ 2.5
PTPN23Q9H3S7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
PTPN23Q9H3S7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
PTPN23Q9H3S7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms