Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LSG1Q9H089 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LSG1Q9H089 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LSG1Q9H089 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
LSG1Q9H089 GCK-205ENST00000437084 1385 ntTSL 5 BASIC24.28■■□□□ 1.48
LSG1Q9H089 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.28■■□□□ 1.48
LSG1Q9H089 TCF3P1-201ENST00000423021 1937 ntBASIC24.27■■□□□ 1.48
LSG1Q9H089 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
LSG1Q9H089 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LSG1Q9H089 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LSG1Q9H089 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
LSG1Q9H089 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC24.27■■□□□ 1.48
LSG1Q9H089 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.27■■□□□ 1.48
LSG1Q9H089 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.27■■□□□ 1.48
LSG1Q9H089 PGM5P4-201ENST00000421970 445 ntBASIC24.27■■□□□ 1.48
LSG1Q9H089 AL355472.2-201ENST00000422958 438 ntBASIC24.27■■□□□ 1.48
LSG1Q9H089 AC093787.1-201ENST00000450396 207 ntBASIC24.27■■□□□ 1.48
LSG1Q9H089 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC24.27■■□□□ 1.48
LSG1Q9H089 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LSG1Q9H089 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
LSG1Q9H089 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
LSG1Q9H089 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LSG1Q9H089 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.26■■□□□ 1.47
LSG1Q9H089 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC24.26■■□□□ 1.47
LSG1Q9H089 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC24.26■■□□□ 1.47
LSG1Q9H089 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
LSG1Q9H089 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
LSG1Q9H089 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
LSG1Q9H089 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC24.26■■□□□ 1.47
LSG1Q9H089 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
LSG1Q9H089 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LSG1Q9H089 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.26■■□□□ 1.47
LSG1Q9H089 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC24.26■■□□□ 1.47
LSG1Q9H089 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.26■■□□□ 1.47
LSG1Q9H089 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.26■■□□□ 1.47
LSG1Q9H089 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LSG1Q9H089 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC24.26■■□□□ 1.47
LSG1Q9H089 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LSG1Q9H089 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
LSG1Q9H089 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.26■■□□□ 1.47
LSG1Q9H089 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LSG1Q9H089 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC24.26■■□□□ 1.47
LSG1Q9H089 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
LSG1Q9H089 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
LSG1Q9H089 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
LSG1Q9H089 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.25■■□□□ 1.47
LSG1Q9H089 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.25■■□□□ 1.47
LSG1Q9H089 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.25■■□□□ 1.47
LSG1Q9H089 CYP2T3P-201ENST00000601990 817 ntBASIC24.25■■□□□ 1.47
LSG1Q9H089 AC005181.1-201ENST00000604782 1256 ntBASIC24.25■■□□□ 1.47
LSG1Q9H089 AL137784.2-201ENST00000607332 1000 ntBASIC24.25■■□□□ 1.47
LSG1Q9H089 AL050303.2-201ENST00000619798 666 ntBASIC24.25■■□□□ 1.47
LSG1Q9H089 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
LSG1Q9H089 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC24.25■■□□□ 1.47
LSG1Q9H089 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
LSG1Q9H089 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
LSG1Q9H089 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC24.25■■□□□ 1.47
LSG1Q9H089 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.25■■□□□ 1.47
LSG1Q9H089 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
LSG1Q9H089 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LSG1Q9H089 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LSG1Q9H089 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LSG1Q9H089 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
LSG1Q9H089 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.24■■□□□ 1.47
LSG1Q9H089 AC069236.1-201ENST00000604339 616 ntBASIC24.24■■□□□ 1.47
LSG1Q9H089 OR10C1-204ENST00000622521 1039 ntBASIC24.24■■□□□ 1.47
LSG1Q9H089 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.24■■□□□ 1.47
LSG1Q9H089 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LSG1Q9H089 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LSG1Q9H089 AC010980.2-201ENST00000587099 1412 ntBASIC24.24■■□□□ 1.47
LSG1Q9H089 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LSG1Q9H089 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
LSG1Q9H089 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
LSG1Q9H089 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LSG1Q9H089 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LSG1Q9H089 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
LSG1Q9H089 KRT18P68-201ENST00000392293 1000 ntBASIC24.23■■□□□ 1.47
LSG1Q9H089 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
LSG1Q9H089 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.23■■□□□ 1.47
LSG1Q9H089 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.23■■□□□ 1.47
LSG1Q9H089 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.23■■□□□ 1.47
LSG1Q9H089 AC105020.6-201ENST00000621523 1217 ntBASIC24.23■■□□□ 1.47
LSG1Q9H089 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.23■■□□□ 1.47
LSG1Q9H089 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.23■■□□□ 1.47
LSG1Q9H089 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC24.23■■□□□ 1.47
LSG1Q9H089 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
LSG1Q9H089 PTBP1P-201ENST00000554374 1601 ntBASIC24.23■■□□□ 1.47
LSG1Q9H089 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
LSG1Q9H089 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
LSG1Q9H089 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
LSG1Q9H089 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LSG1Q9H089 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LSG1Q9H089 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC24.23■■□□□ 1.47
LSG1Q9H089 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
LSG1Q9H089 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.22■■□□□ 1.47
LSG1Q9H089 AFG3L1P-217ENST00000557444 2447 ntBASIC24.22■■□□□ 1.47
LSG1Q9H089 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
LSG1Q9H089 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
LSG1Q9H089 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
LSG1Q9H089 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms