Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 AC245052.3-201ENST00000450182 901 ntBASIC19.3■□□□□ 0.68
THUMPD3Q9BV44 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
THUMPD3Q9BV44 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
THUMPD3Q9BV44 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.3■□□□□ 0.68
THUMPD3Q9BV44 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
THUMPD3Q9BV44 RARRES2P11-201ENST00000635158 484 ntBASIC19.3■□□□□ 0.68
THUMPD3Q9BV44 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.3■□□□□ 0.68
THUMPD3Q9BV44 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
THUMPD3Q9BV44 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THUMPD3Q9BV44 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
THUMPD3Q9BV44 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 YBX1P1-201ENST00000445822 960 ntBASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 AC079140.4-201ENST00000507448 529 ntBASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD3Q9BV44 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 SMG8-203ENST00000578922 2178 ntBASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 AC120498.10-201ENST00000621827 505 ntBASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 KRT87P-202ENST00000534226 1464 ntBASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.28■□□□□ 0.68
THUMPD3Q9BV44 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
THUMPD3Q9BV44 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
THUMPD3Q9BV44 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.27■□□□□ 0.68
THUMPD3Q9BV44 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.27■□□□□ 0.68
THUMPD3Q9BV44 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.27■□□□□ 0.68
THUMPD3Q9BV44 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
THUMPD3Q9BV44 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
THUMPD3Q9BV44 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.27■□□□□ 0.68
THUMPD3Q9BV44 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
THUMPD3Q9BV44 RNF165-205ENST00000588679 2904 ntBASIC19.27■□□□□ 0.68
THUMPD3Q9BV44 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
THUMPD3Q9BV44 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
THUMPD3Q9BV44 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.27■□□□□ 0.68
THUMPD3Q9BV44 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
THUMPD3Q9BV44 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
THUMPD3Q9BV44 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
THUMPD3Q9BV44 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
THUMPD3Q9BV44 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
THUMPD3Q9BV44 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
THUMPD3Q9BV44 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 KRT16P2-201ENST00000414673 1423 ntBASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.26■□□□□ 0.67
THUMPD3Q9BV44 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms