Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXC2Q99958 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
FOXC2Q99958 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXC2Q99958 NBPF21P-201ENST00000425093 1451 ntBASIC17.12■□□□□ 0.33
FOXC2Q99958 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
FOXC2Q99958 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXC2Q99958 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXC2Q99958 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXC2Q99958 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXC2Q99958 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXC2Q99958 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXC2Q99958 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXC2Q99958 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXC2Q99958 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXC2Q99958 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.11■□□□□ 0.33
FOXC2Q99958 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXC2Q99958 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
FOXC2Q99958 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
FOXC2Q99958 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.11■□□□□ 0.33
FOXC2Q99958 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXC2Q99958 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXC2Q99958 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXC2Q99958 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXC2Q99958 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXC2Q99958 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
FOXC2Q99958 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXC2Q99958 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXC2Q99958 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FOXC2Q99958 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXC2Q99958 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXC2Q99958 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXC2Q99958 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
FOXC2Q99958 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXC2Q99958 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXC2Q99958 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXC2Q99958 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXC2Q99958 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.1■□□□□ 0.33
FOXC2Q99958 FITM1-202ENST00000559294 800 ntBASIC17.1■□□□□ 0.33
FOXC2Q99958 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXC2Q99958 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXC2Q99958 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXC2Q99958 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXC2Q99958 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXC2Q99958 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
FOXC2Q99958 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.1■□□□□ 0.33
FOXC2Q99958 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXC2Q99958 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXC2Q99958 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXC2Q99958 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXC2Q99958 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXC2Q99958 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXC2Q99958 AC104076.2-201ENST00000448912 469 ntBASIC17.09■□□□□ 0.33
FOXC2Q99958 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
FOXC2Q99958 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
FOXC2Q99958 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXC2Q99958 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
FOXC2Q99958 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.09■□□□□ 0.33
FOXC2Q99958 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXC2Q99958 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXC2Q99958 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXC2Q99958 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXC2Q99958 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FOXC2Q99958 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXC2Q99958 AC092053.2-201ENST00000640557 1818 ntBASIC17.09■□□□□ 0.33
FOXC2Q99958 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.09■□□□□ 0.33
FOXC2Q99958 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
FOXC2Q99958 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.09■□□□□ 0.33
FOXC2Q99958 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXC2Q99958 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXC2Q99958 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXC2Q99958 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FOXC2Q99958 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.08■□□□□ 0.32
FOXC2Q99958 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXC2Q99958 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXC2Q99958 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXC2Q99958 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FOXC2Q99958 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXC2Q99958 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXC2Q99958 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXC2Q99958 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.08■□□□□ 0.32
FOXC2Q99958 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
FOXC2Q99958 AP002982.1-201ENST00000492365 877 ntBASIC17.08■□□□□ 0.32
FOXC2Q99958 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXC2Q99958 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.08■□□□□ 0.32
FOXC2Q99958 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.08■□□□□ 0.32
FOXC2Q99958 AC010947.1-201ENST00000623454 693 ntBASIC17.08■□□□□ 0.32
FOXC2Q99958 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXC2Q99958 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXC2Q99958 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
FOXC2Q99958 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
FOXC2Q99958 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXC2Q99958 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.08■□□□□ 0.32
FOXC2Q99958 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FOXC2Q99958 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.07■□□□□ 0.32
FOXC2Q99958 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
FOXC2Q99958 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms