Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE1Q99829 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.25■□□□□ 0.83
CPNE1Q99829 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.25■□□□□ 0.83
CPNE1Q99829 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.24■□□□□ 0.83
CPNE1Q99829 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
CPNE1Q99829 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CPNE1Q99829 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE1Q99829 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE1Q99829 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.24■□□□□ 0.83
CPNE1Q99829 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE1Q99829 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE1Q99829 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CPNE1Q99829 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.24■□□□□ 0.83
CPNE1Q99829 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CPNE1Q99829 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CPNE1Q99829 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE1Q99829 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE1Q99829 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE1Q99829 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.24■□□□□ 0.83
CPNE1Q99829 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.24■□□□□ 0.83
CPNE1Q99829 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CPNE1Q99829 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.24■□□□□ 0.83
CPNE1Q99829 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE1Q99829 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.23■□□□□ 0.83
CPNE1Q99829 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.23■□□□□ 0.83
CPNE1Q99829 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.23■□□□□ 0.83
CPNE1Q99829 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE1Q99829 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE1Q99829 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.23■□□□□ 0.83
CPNE1Q99829 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE1Q99829 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE1Q99829 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.23■□□□□ 0.83
CPNE1Q99829 AC097381.1-201ENST00000429019 1296 ntBASIC20.23■□□□□ 0.83
CPNE1Q99829 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE1Q99829 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
CPNE1Q99829 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.23■□□□□ 0.83
CPNE1Q99829 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE1Q99829 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE1Q99829 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE1Q99829 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.23■□□□□ 0.83
CPNE1Q99829 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE1Q99829 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE1Q99829 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE1Q99829 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.22■□□□□ 0.83
CPNE1Q99829 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE1Q99829 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.22■□□□□ 0.83
CPNE1Q99829 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE1Q99829 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE1Q99829 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.22■□□□□ 0.83
CPNE1Q99829 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE1Q99829 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE1Q99829 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.22■□□□□ 0.83
CPNE1Q99829 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE1Q99829 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE1Q99829 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.22■□□□□ 0.83
CPNE1Q99829 UBE2DNL-204ENST00000602536 740 ntBASIC20.22■□□□□ 0.83
CPNE1Q99829 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.22■□□□□ 0.83
CPNE1Q99829 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE1Q99829 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE1Q99829 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE1Q99829 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CPNE1Q99829 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE1Q99829 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE1Q99829 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE1Q99829 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CPNE1Q99829 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE1Q99829 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE1Q99829 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.21■□□□□ 0.83
CPNE1Q99829 KRT18P61-201ENST00000585825 1298 ntBASIC20.21■□□□□ 0.83
CPNE1Q99829 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.21■□□□□ 0.83
CPNE1Q99829 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.21■□□□□ 0.83
CPNE1Q99829 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE1Q99829 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CPNE1Q99829 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE1Q99829 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE1Q99829 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE1Q99829 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE1Q99829 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.2■□□□□ 0.83
CPNE1Q99829 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CPNE1Q99829 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE1Q99829 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CPNE1Q99829 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CPNE1Q99829 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.2■□□□□ 0.82
CPNE1Q99829 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.2■□□□□ 0.82
CPNE1Q99829 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE1Q99829 PGM5P4-201ENST00000421970 445 ntBASIC20.2■□□□□ 0.82
CPNE1Q99829 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.2■□□□□ 0.82
CPNE1Q99829 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE1Q99829 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE1Q99829 MYCNOS-205ENST00000641950 531 ntBASIC20.2■□□□□ 0.82
CPNE1Q99829 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE1Q99829 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
CPNE1Q99829 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE1Q99829 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.2■□□□□ 0.82
CPNE1Q99829 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE1Q99829 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
CPNE1Q99829 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE1Q99829 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE1Q99829 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CPNE1Q99829 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms