Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CSMD1Q96PZ7 KRT18P16-201ENST00000510337 1294 ntBASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 AC022616.7-201ENST00000525383 220 ntBASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 FITM1-202ENST00000559294 800 ntBASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSMD1Q96PZ7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 AL121906.2-201ENST00000621597 723 ntBASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 FAM8A6P-201ENST00000407496 1135 ntBASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSMD1Q96PZ7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSMD1Q96PZ7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSMD1Q96PZ7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.33■□□□□ 0.37
CSMD1Q96PZ7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSMD1Q96PZ7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CSMD1Q96PZ7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.33■□□□□ 0.37
CSMD1Q96PZ7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CSMD1Q96PZ7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSMD1Q96PZ7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSMD1Q96PZ7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CSMD1Q96PZ7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.33■□□□□ 0.36
CSMD1Q96PZ7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.33■□□□□ 0.36
CSMD1Q96PZ7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.33■□□□□ 0.36
CSMD1Q96PZ7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSMD1Q96PZ7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CSMD1Q96PZ7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSMD1Q96PZ7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CSMD1Q96PZ7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.33■□□□□ 0.36
CSMD1Q96PZ7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.33■□□□□ 0.36
CSMD1Q96PZ7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CSMD1Q96PZ7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
CSMD1Q96PZ7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.33■□□□□ 0.36
CSMD1Q96PZ7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
CSMD1Q96PZ7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 CDV3P1-201ENST00000471403 739 ntBASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 FAM87A-204ENST00000613235 858 ntBASIC17.32■□□□□ 0.36
CSMD1Q96PZ7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.31■□□□□ 0.36
CSMD1Q96PZ7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms