Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC24.02■■□□□ 1.44
NEK1Q96PY6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC24.02■■□□□ 1.44
NEK1Q96PY6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
NEK1Q96PY6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NEK1Q96PY6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
NEK1Q96PY6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NEK1Q96PY6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NEK1Q96PY6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.02■■□□□ 1.44
NEK1Q96PY6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC24.02■■□□□ 1.44
NEK1Q96PY6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
NEK1Q96PY6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
NEK1Q96PY6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC24.02■■□□□ 1.44
NEK1Q96PY6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NEK1Q96PY6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC24.02■■□□□ 1.44
NEK1Q96PY6 AC010980.2-201ENST00000587099 1412 ntBASIC24.01■■□□□ 1.43
NEK1Q96PY6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.01■■□□□ 1.43
NEK1Q96PY6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NEK1Q96PY6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NEK1Q96PY6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NEK1Q96PY6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.01■■□□□ 1.43
NEK1Q96PY6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.01■■□□□ 1.43
NEK1Q96PY6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NEK1Q96PY6 AL355472.2-201ENST00000422958 438 ntBASIC24.01■■□□□ 1.43
NEK1Q96PY6 AC026185.1-201ENST00000445748 174 ntBASIC24.01■■□□□ 1.43
NEK1Q96PY6 AC093787.1-201ENST00000450396 207 ntBASIC24.01■■□□□ 1.43
NEK1Q96PY6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.01■■□□□ 1.43
NEK1Q96PY6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
NEK1Q96PY6 CYP2T3P-201ENST00000601990 817 ntBASIC24.01■■□□□ 1.43
NEK1Q96PY6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NEK1Q96PY6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC24.01■■□□□ 1.43
NEK1Q96PY6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NEK1Q96PY6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NEK1Q96PY6 DPP3P2-201ENST00000416030 1696 ntBASIC24.01■■□□□ 1.43
NEK1Q96PY6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC24.01■■□□□ 1.43
NEK1Q96PY6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NEK1Q96PY6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC24.01■■□□□ 1.43
NEK1Q96PY6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.01■■□□□ 1.43
NEK1Q96PY6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
NEK1Q96PY6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NEK1Q96PY6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC24.01■■□□□ 1.43
NEK1Q96PY6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NEK1Q96PY6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24■■□□□ 1.43
NEK1Q96PY6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC24■■□□□ 1.43
NEK1Q96PY6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC24■■□□□ 1.43
NEK1Q96PY6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24■■□□□ 1.43
NEK1Q96PY6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC24■■□□□ 1.43
NEK1Q96PY6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
NEK1Q96PY6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
NEK1Q96PY6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NEK1Q96PY6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NEK1Q96PY6 KRT18P68-201ENST00000392293 1000 ntBASIC24■■□□□ 1.43
NEK1Q96PY6 AL512625.2-201ENST00000417533 625 ntBASIC24■■□□□ 1.43
NEK1Q96PY6 AL050303.2-201ENST00000619798 666 ntBASIC24■■□□□ 1.43
NEK1Q96PY6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
NEK1Q96PY6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24■■□□□ 1.43
NEK1Q96PY6 AL391422.3-201ENST00000603791 2761 ntBASIC24■■□□□ 1.43
NEK1Q96PY6 AC099778.1-201ENST00000568593 1911 ntBASIC24■■□□□ 1.43
NEK1Q96PY6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NEK1Q96PY6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NEK1Q96PY6 AC133552.2-202ENST00000575694 574 ntBASIC23.99■■□□□ 1.43
NEK1Q96PY6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.99■■□□□ 1.43
NEK1Q96PY6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NEK1Q96PY6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.99■■□□□ 1.43
NEK1Q96PY6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
NEK1Q96PY6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
NEK1Q96PY6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
NEK1Q96PY6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NEK1Q96PY6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NEK1Q96PY6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NEK1Q96PY6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.98■■□□□ 1.43
NEK1Q96PY6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.98■■□□□ 1.43
NEK1Q96PY6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NEK1Q96PY6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.98■■□□□ 1.43
NEK1Q96PY6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NEK1Q96PY6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.98■■□□□ 1.43
NEK1Q96PY6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.98■■□□□ 1.43
NEK1Q96PY6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
NEK1Q96PY6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
NEK1Q96PY6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
NEK1Q96PY6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.98■■□□□ 1.43
NEK1Q96PY6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
NEK1Q96PY6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.98■■□□□ 1.43
NEK1Q96PY6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NEK1Q96PY6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.98■■□□□ 1.43
NEK1Q96PY6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NEK1Q96PY6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
NEK1Q96PY6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.97■■□□□ 1.43
NEK1Q96PY6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
NEK1Q96PY6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NEK1Q96PY6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.97■■□□□ 1.43
NEK1Q96PY6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
NEK1Q96PY6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
NEK1Q96PY6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
NEK1Q96PY6 CROCCP5-201ENST00000436658 830 ntBASIC23.97■■□□□ 1.43
NEK1Q96PY6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.97■■□□□ 1.43
NEK1Q96PY6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
NEK1Q96PY6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.97■■□□□ 1.43
NEK1Q96PY6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.97■■□□□ 1.43
NEK1Q96PY6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.97■■□□□ 1.43
NEK1Q96PY6 AC105020.6-201ENST00000621523 1217 ntBASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms