Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC3BQ96PB8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.87■□□□□ 0.93
LRRC3BQ96PB8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.87■□□□□ 0.93
LRRC3BQ96PB8 RARRES2P10-201ENST00000564312 460 ntBASIC20.87■□□□□ 0.93
LRRC3BQ96PB8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LRRC3BQ96PB8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC3BQ96PB8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC3BQ96PB8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC3BQ96PB8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.87■□□□□ 0.93
LRRC3BQ96PB8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC3BQ96PB8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.87■□□□□ 0.93
LRRC3BQ96PB8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 KRT17P2-201ENST00000300992 1314 ntBASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 PRKY-204ENST00000533551 1019 ntBASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC3BQ96PB8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 AC023632.3-201ENST00000521633 145 ntBASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 AL135905.2-201ENST00000584934 1404 ntBASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC3BQ96PB8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC3BQ96PB8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 FAM210CP-201ENST00000445714 574 ntBASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 AL355075.4-201ENST00000554988 638 ntBASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 AP001412.1-201ENST00000608405 714 ntBASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.83■□□□□ 0.93
LRRC3BQ96PB8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRRC3BQ96PB8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRRC3BQ96PB8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms