Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CMTM3Q96MX0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.39■□□□□ 0.38
CMTM3Q96MX0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
CMTM3Q96MX0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CMTM3Q96MX0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CMTM3Q96MX0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CMTM3Q96MX0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.39■□□□□ 0.38
CMTM3Q96MX0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 POU5F1P4-201ENST00000413175 1085 ntBASIC17.39■□□□□ 0.37
CMTM3Q96MX0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMTM3Q96MX0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 AL138781.2-201ENST00000617896 1843 ntBASIC17.38■□□□□ 0.37
CMTM3Q96MX0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.38■□□□□ 0.37
CMTM3Q96MX0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 RARRES2P11-201ENST00000635158 484 ntBASIC17.38■□□□□ 0.37
CMTM3Q96MX0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMTM3Q96MX0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms