Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
SHDQ96IW2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.57■□□□□ 0.88
SHDQ96IW2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHDQ96IW2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHDQ96IW2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHDQ96IW2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.57■□□□□ 0.88
SHDQ96IW2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.57■□□□□ 0.88
SHDQ96IW2 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.57■□□□□ 0.88
SHDQ96IW2 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.57■□□□□ 0.88
SHDQ96IW2 KRT8P9-201ENST00000558927 1449 ntBASIC20.57■□□□□ 0.88
SHDQ96IW2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.57■□□□□ 0.88
SHDQ96IW2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SHDQ96IW2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.57■□□□□ 0.88
SHDQ96IW2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHDQ96IW2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SHDQ96IW2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SHDQ96IW2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHDQ96IW2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SHDQ96IW2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHDQ96IW2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.56■□□□□ 0.88
SHDQ96IW2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SHDQ96IW2 KRT18P57-201ENST00000443599 1254 ntBASIC20.56■□□□□ 0.88
SHDQ96IW2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SHDQ96IW2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.56■□□□□ 0.88
SHDQ96IW2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.56■□□□□ 0.88
SHDQ96IW2 FITM1-202ENST00000559294 800 ntBASIC20.56■□□□□ 0.88
SHDQ96IW2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHDQ96IW2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHDQ96IW2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SHDQ96IW2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHDQ96IW2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.56■□□□□ 0.88
SHDQ96IW2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHDQ96IW2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.56■□□□□ 0.88
SHDQ96IW2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHDQ96IW2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.55■□□□□ 0.88
SHDQ96IW2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHDQ96IW2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHDQ96IW2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHDQ96IW2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHDQ96IW2 TERF1P1-201ENST00000311003 1181 ntBASIC20.55■□□□□ 0.88
SHDQ96IW2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SHDQ96IW2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHDQ96IW2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
SHDQ96IW2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SHDQ96IW2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SHDQ96IW2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHDQ96IW2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.55■□□□□ 0.88
SHDQ96IW2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHDQ96IW2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.55■□□□□ 0.88
SHDQ96IW2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SHDQ96IW2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHDQ96IW2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.54■□□□□ 0.88
SHDQ96IW2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.54■□□□□ 0.88
SHDQ96IW2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.54■□□□□ 0.88
SHDQ96IW2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SHDQ96IW2 KSR1P1-201ENST00000446298 240 ntBASIC20.54■□□□□ 0.88
SHDQ96IW2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
SHDQ96IW2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHDQ96IW2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SHDQ96IW2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHDQ96IW2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
SHDQ96IW2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHDQ96IW2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHDQ96IW2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHDQ96IW2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
SHDQ96IW2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.53■□□□□ 0.88
SHDQ96IW2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
SHDQ96IW2 AC116562.2-201ENST00000507042 360 ntBASIC20.53■□□□□ 0.88
SHDQ96IW2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.53■□□□□ 0.88
SHDQ96IW2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHDQ96IW2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHDQ96IW2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHDQ96IW2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHDQ96IW2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SHDQ96IW2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHDQ96IW2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHDQ96IW2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHDQ96IW2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHDQ96IW2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHDQ96IW2 SLC25A3P1-201ENST00000443844 931 ntBASIC20.52■□□□□ 0.88
SHDQ96IW2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHDQ96IW2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.52■□□□□ 0.88
SHDQ96IW2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.52■□□□□ 0.88
SHDQ96IW2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.52■□□□□ 0.88
SHDQ96IW2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SHDQ96IW2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.52■□□□□ 0.88
SHDQ96IW2 CR392000.1-201ENST00000624770 1228 ntBASIC20.52■□□□□ 0.88
SHDQ96IW2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SHDQ96IW2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHDQ96IW2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
SHDQ96IW2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHDQ96IW2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHDQ96IW2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHDQ96IW2 AC124283.5-201ENST00000624661 1809 ntBASIC20.51■□□□□ 0.87
SHDQ96IW2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHDQ96IW2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SHDQ96IW2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHDQ96IW2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SHDQ96IW2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.51■□□□□ 0.87
SHDQ96IW2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms