Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.02■□□□□ 0.8
SH3KBP1Q96B97 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
SH3KBP1Q96B97 AC121338.2-201ENST00000622535 1744 ntBASIC20.02■□□□□ 0.79
SH3KBP1Q96B97 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
SH3KBP1Q96B97 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SH3KBP1Q96B97 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 AL355472.2-201ENST00000422958 438 ntBASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3KBP1Q96B97 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SH3KBP1Q96B97 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SH3KBP1Q96B97 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20■□□□□ 0.79
SH3KBP1Q96B97 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20■□□□□ 0.79
SH3KBP1Q96B97 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SH3KBP1Q96B97 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
SH3KBP1Q96B97 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SH3KBP1Q96B97 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SH3KBP1Q96B97 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20■□□□□ 0.79
SH3KBP1Q96B97 OR2A1-AS1-201ENST00000462305 773 ntBASIC20■□□□□ 0.79
SH3KBP1Q96B97 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20■□□□□ 0.79
SH3KBP1Q96B97 HES2-205ENST00000487437 968 ntTSL 3 BASIC20■□□□□ 0.79
SH3KBP1Q96B97 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20■□□□□ 0.79
SH3KBP1Q96B97 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20■□□□□ 0.79
SH3KBP1Q96B97 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SH3KBP1Q96B97 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20■□□□□ 0.79
SH3KBP1Q96B97 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20■□□□□ 0.79
SH3KBP1Q96B97 AC083880.1-201ENST00000608266 535 ntBASIC20■□□□□ 0.79
SH3KBP1Q96B97 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20■□□□□ 0.79
SH3KBP1Q96B97 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20■□□□□ 0.79
SH3KBP1Q96B97 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20■□□□□ 0.79
SH3KBP1Q96B97 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20■□□□□ 0.79
SH3KBP1Q96B97 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 KRT17P1-201ENST00000399211 1546 ntBASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 AL121603.2-201ENST00000557373 2117 ntBASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SH3KBP1Q96B97 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 CYP21A1P-202ENST00000354927 1481 ntBASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH3KBP1Q96B97 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms