Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 KRT18P20-201ENST00000548986 1279 ntBASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC44A1Q8WWI5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 RBM17P2-201ENST00000616397 1405 ntBASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 AC007322.3-201ENST00000426526 701 ntBASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 AC142381.2-201ENST00000566120 298 ntBASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 AC005837.3-201ENST00000612163 286 ntBASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 LINC02228-203ENST00000641970 1355 ntBASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC44A1Q8WWI5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC44A1Q8WWI5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC44A1Q8WWI5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC44A1Q8WWI5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SLC44A1Q8WWI5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC44A1Q8WWI5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC44A1Q8WWI5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC44A1Q8WWI5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC44A1Q8WWI5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.28■□□□□ 0.84
SLC44A1Q8WWI5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC44A1Q8WWI5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
SLC44A1Q8WWI5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC44A1Q8WWI5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC44A1Q8WWI5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SLC44A1Q8WWI5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC44A1Q8WWI5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC44A1Q8WWI5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.27■□□□□ 0.84
SLC44A1Q8WWI5 AC018445.3-201ENST00000624177 1945 ntBASIC20.27■□□□□ 0.84
SLC44A1Q8WWI5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC44A1Q8WWI5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
SLC44A1Q8WWI5 BX323043.1-201ENST00000641006 1765 ntBASIC20.27■□□□□ 0.84
SLC44A1Q8WWI5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.27■□□□□ 0.84
SLC44A1Q8WWI5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
SLC44A1Q8WWI5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
SLC44A1Q8WWI5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC44A1Q8WWI5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC44A1Q8WWI5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC44A1Q8WWI5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC44A1Q8WWI5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC44A1Q8WWI5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC44A1Q8WWI5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SLC44A1Q8WWI5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC44A1Q8WWI5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC44A1Q8WWI5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms