Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM4Q8WVI0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 AP004607.4-201ENST00000530158 1459 ntBASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 SLC47A1P1-202ENST00000449666 945 ntBASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM4Q8WVI0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM4Q8WVI0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 AC239859.2-201ENST00000444165 318 ntBASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 MIR2861-201ENST00000636310 90 ntBASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.29■□□□□ 0.36
SMIM4Q8WVI0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 AC005082.1-201ENST00000413042 2259 ntBASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms