Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 C2orf69P4-201ENST00000565394 541 ntBASIC20.57■□□□□ 0.88
CHD5Q8TDI0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.57■□□□□ 0.88
CHD5Q8TDI0 AC092720.2-201ENST00000602388 1665 ntBASIC20.57■□□□□ 0.88
CHD5Q8TDI0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHD5Q8TDI0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHD5Q8TDI0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHD5Q8TDI0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHD5Q8TDI0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHD5Q8TDI0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.56■□□□□ 0.88
CHD5Q8TDI0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHD5Q8TDI0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHD5Q8TDI0 AL157384.1-201ENST00000445995 2473 ntBASIC20.56■□□□□ 0.88
CHD5Q8TDI0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHD5Q8TDI0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.56■□□□□ 0.88
CHD5Q8TDI0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CHD5Q8TDI0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHD5Q8TDI0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.56■□□□□ 0.88
CHD5Q8TDI0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.55■□□□□ 0.88
CHD5Q8TDI0 HLA-B-256ENST00000639848 1089 ntBASIC20.55■□□□□ 0.88
CHD5Q8TDI0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD5Q8TDI0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 POM121L13P-201ENST00000422362 380 ntBASIC20.54■□□□□ 0.88
CHD5Q8TDI0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 CD99P1-205ENST00000527459 561 ntBASIC20.54■□□□□ 0.88
CHD5Q8TDI0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.54■□□□□ 0.88
CHD5Q8TDI0 AC005829.2-201ENST00000571422 1056 ntBASIC20.54■□□□□ 0.88
CHD5Q8TDI0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD5Q8TDI0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.53■□□□□ 0.88
CHD5Q8TDI0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD5Q8TDI0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CHD5Q8TDI0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHD5Q8TDI0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.53■□□□□ 0.88
CHD5Q8TDI0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CHD5Q8TDI0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHD5Q8TDI0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD5Q8TDI0 AC023632.3-201ENST00000521633 145 ntBASIC20.53■□□□□ 0.88
CHD5Q8TDI0 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD5Q8TDI0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.53■□□□□ 0.88
CHD5Q8TDI0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms