Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 RNF165-205ENST00000588679 2904 ntBASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 DPP3P2-201ENST00000416030 1696 ntBASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 IRS3P-201ENST00000223076 1006 ntBASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 ZNRF2P3-201ENST00000424200 374 ntBASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 AC243732.1-201ENST00000612648 864 ntBASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 AL020996.1-203ENST00000536896 2307 ntBASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4Y2Q8TD47 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 AC005332.7-201ENST00000614046 2005 ntBASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 AC091799.1-201ENST00000422823 811 ntBASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 AC087289.5-201ENST00000586076 3175 ntBASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 AC098818.2-201ENST00000564925 2320 ntBASIC17.71■□□□□ 0.43
RPS4Y2Q8TD47 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RPS4Y2Q8TD47 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RPS4Y2Q8TD47 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.71■□□□□ 0.42
RPS4Y2Q8TD47 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 MIR935-201ENST00000401179 91 ntBASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4Y2Q8TD47 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 SLC7A5P2-201ENST00000553010 536 ntBASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 DUX4L2-201ENST00000561772 1275 ntBASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 DUX4L6-201ENST00000626483 1275 ntBASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 DUX4L1-201ENST00000627662 1275 ntBASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 DUX4L8-201ENST00000629013 1275 ntBASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 DUX4L3-201ENST00000630187 1275 ntBASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 DUX4L7-201ENST00000630678 1275 ntBASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 DUX4L5-201ENST00000630834 1275 ntBASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4Y2Q8TD47 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS4Y2Q8TD47 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms