Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCLL1Q8TB92 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
HMGCLL1Q8TB92 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGCLL1Q8TB92 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGCLL1Q8TB92 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGCLL1Q8TB92 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.91■□□□□ 0.78
HMGCLL1Q8TB92 AC006970.2-201ENST00000450065 779 ntBASIC19.91■□□□□ 0.78
HMGCLL1Q8TB92 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCLL1Q8TB92 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.91■□□□□ 0.78
HMGCLL1Q8TB92 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCLL1Q8TB92 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCLL1Q8TB92 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGCLL1Q8TB92 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCLL1Q8TB92 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
HMGCLL1Q8TB92 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGCLL1Q8TB92 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
HMGCLL1Q8TB92 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCLL1Q8TB92 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.9■□□□□ 0.78
HMGCLL1Q8TB92 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.9■□□□□ 0.78
HMGCLL1Q8TB92 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HMGCLL1Q8TB92 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HMGCLL1Q8TB92 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLL1Q8TB92 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLL1Q8TB92 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLL1Q8TB92 NCF1B-203ENST00000435988 1254 ntBASIC19.9■□□□□ 0.78
HMGCLL1Q8TB92 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGCLL1Q8TB92 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLL1Q8TB92 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLL1Q8TB92 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLL1Q8TB92 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLL1Q8TB92 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLL1Q8TB92 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLL1Q8TB92 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HMGCLL1Q8TB92 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HMGCLL1Q8TB92 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCLL1Q8TB92 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCLL1Q8TB92 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.89■□□□□ 0.77
HMGCLL1Q8TB92 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.89■□□□□ 0.77
HMGCLL1Q8TB92 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCLL1Q8TB92 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCLL1Q8TB92 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCLL1Q8TB92 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.89■□□□□ 0.77
HMGCLL1Q8TB92 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.89■□□□□ 0.77
HMGCLL1Q8TB92 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.89■□□□□ 0.77
HMGCLL1Q8TB92 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.89■□□□□ 0.77
HMGCLL1Q8TB92 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCLL1Q8TB92 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCLL1Q8TB92 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLL1Q8TB92 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
HMGCLL1Q8TB92 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLL1Q8TB92 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HMGCLL1Q8TB92 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.88■□□□□ 0.77
HMGCLL1Q8TB92 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLL1Q8TB92 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.88■□□□□ 0.77
HMGCLL1Q8TB92 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLL1Q8TB92 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
HMGCLL1Q8TB92 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HMGCLL1Q8TB92 AL121832.2-201ENST00000610979 668 ntBASIC19.88■□□□□ 0.77
HMGCLL1Q8TB92 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.88■□□□□ 0.77
HMGCLL1Q8TB92 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLL1Q8TB92 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HMGCLL1Q8TB92 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLL1Q8TB92 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLL1Q8TB92 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.88■□□□□ 0.77
HMGCLL1Q8TB92 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 AF201337.1-201ENST00000520239 748 ntBASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLL1Q8TB92 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCLL1Q8TB92 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms