Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 AC092720.2-201ENST00000602388 1665 ntBASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DNAAF1Q8NEP3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 AC027612.3-201ENST00000413684 1047 ntBASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 AC005837.3-201ENST00000612163 286 ntBASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
DNAAF1Q8NEP3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
DNAAF1Q8NEP3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
DNAAF1Q8NEP3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.77■□□□□ 0.43
DNAAF1Q8NEP3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
DNAAF1Q8NEP3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
DNAAF1Q8NEP3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.76■□□□□ 0.43
DNAAF1Q8NEP3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 AC138907.5-202ENST00000569484 235 ntBASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 MIR6084-201ENST00000622012 110 ntBASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
DNAAF1Q8NEP3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DNAAF1Q8NEP3 SMG8-203ENST00000578922 2178 ntBASIC17.74■□□□□ 0.43
DNAAF1Q8NEP3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.74■□□□□ 0.43
DNAAF1Q8NEP3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNAAF1Q8NEP3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNAAF1Q8NEP3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
DNAAF1Q8NEP3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNAAF1Q8NEP3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms