Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.7
CFAP43Q8NDM7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC31.95■■■□□ 2.7
CFAP43Q8NDM7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC31.95■■■□□ 2.7
CFAP43Q8NDM7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC31.95■■■□□ 2.7
CFAP43Q8NDM7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC31.95■■■□□ 2.7
CFAP43Q8NDM7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC31.95■■■□□ 2.7
CFAP43Q8NDM7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CFAP43Q8NDM7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC31.94■■■□□ 2.7
CFAP43Q8NDM7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC31.94■■■□□ 2.7
CFAP43Q8NDM7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC31.94■■■□□ 2.7
CFAP43Q8NDM7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
CFAP43Q8NDM7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CFAP43Q8NDM7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CFAP43Q8NDM7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC31.93■■■□□ 2.7
CFAP43Q8NDM7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CFAP43Q8NDM7 AC113347.1-201ENST00000413321 391 ntBASIC31.93■■■□□ 2.7
CFAP43Q8NDM7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CFAP43Q8NDM7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC31.93■■■□□ 2.7
CFAP43Q8NDM7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC31.93■■■□□ 2.7
CFAP43Q8NDM7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
CFAP43Q8NDM7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC31.93■■■□□ 2.7
CFAP43Q8NDM7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC31.93■■■□□ 2.7
CFAP43Q8NDM7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CFAP43Q8NDM7 AL024507.2-201ENST00000606070 2574 ntBASIC31.93■■■□□ 2.7
CFAP43Q8NDM7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CFAP43Q8NDM7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC31.93■■■□□ 2.7
CFAP43Q8NDM7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CFAP43Q8NDM7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC31.92■■■□□ 2.7
CFAP43Q8NDM7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC31.92■■■□□ 2.7
CFAP43Q8NDM7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC31.92■■■□□ 2.7
CFAP43Q8NDM7 AC005829.2-201ENST00000571422 1056 ntBASIC31.92■■■□□ 2.7
CFAP43Q8NDM7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC31.92■■■□□ 2.7
CFAP43Q8NDM7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC31.92■■■□□ 2.7
CFAP43Q8NDM7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC31.92■■■□□ 2.7
CFAP43Q8NDM7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
CFAP43Q8NDM7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CFAP43Q8NDM7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
CFAP43Q8NDM7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC31.92■■■□□ 2.7
CFAP43Q8NDM7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC31.92■■■□□ 2.7
CFAP43Q8NDM7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CFAP43Q8NDM7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC31.92■■■□□ 2.7
CFAP43Q8NDM7 NME3-204ENST00000563498 920 ntTSL 2 BASIC31.92■■■□□ 2.7
CFAP43Q8NDM7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC31.92■■■□□ 2.7
CFAP43Q8NDM7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFAP43Q8NDM7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC31.91■■■□□ 2.7
CFAP43Q8NDM7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFAP43Q8NDM7 ARMC10P1-201ENST00000313754 855 ntBASIC31.91■■■□□ 2.7
CFAP43Q8NDM7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFAP43Q8NDM7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC31.91■■■□□ 2.7
CFAP43Q8NDM7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFAP43Q8NDM7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC31.91■■■□□ 2.7
CFAP43Q8NDM7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC31.91■■■□□ 2.7
CFAP43Q8NDM7 AC120498.8-201ENST00000614275 531 ntBASIC31.91■■■□□ 2.7
CFAP43Q8NDM7 MIR2861-201ENST00000636310 90 ntBASIC31.91■■■□□ 2.7
CFAP43Q8NDM7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFAP43Q8NDM7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFAP43Q8NDM7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFAP43Q8NDM7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
CFAP43Q8NDM7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC31.9■■■□□ 2.7
CFAP43Q8NDM7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CFAP43Q8NDM7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC31.9■■■□□ 2.7
CFAP43Q8NDM7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CFAP43Q8NDM7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CFAP43Q8NDM7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CFAP43Q8NDM7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 BID-212ENST00000614949 1988 ntTSL 5 BASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 MMP23A-201ENST00000234610 1017 ntBASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CFAP43Q8NDM7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC31.89■■■□□ 2.69
CFAP43Q8NDM7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC31.89■■■□□ 2.69
CFAP43Q8NDM7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CFAP43Q8NDM7 FBXW4P1-201ENST00000426721 2239 ntBASIC31.88■■■□□ 2.69
CFAP43Q8NDM7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
CFAP43Q8NDM7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC31.88■■■□□ 2.69
CFAP43Q8NDM7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC31.88■■■□□ 2.69
CFAP43Q8NDM7 RER1-204ENST00000378518 522 ntTSL 3 BASIC31.88■■■□□ 2.69
CFAP43Q8NDM7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
CFAP43Q8NDM7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC31.88■■■□□ 2.69
CFAP43Q8NDM7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC31.88■■■□□ 2.69
CFAP43Q8NDM7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC31.88■■■□□ 2.69
CFAP43Q8NDM7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC31.88■■■□□ 2.69
CFAP43Q8NDM7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CFAP43Q8NDM7 KRT8P9-201ENST00000558927 1449 ntBASIC31.87■■■□□ 2.69
CFAP43Q8NDM7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CFAP43Q8NDM7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CFAP43Q8NDM7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms