Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 KRT8P36-201ENST00000489121 1440 ntBASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 FAM197Y4-202ENST00000622692 608 ntBASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 PLK5-205ENST00000642079 1969 ntBASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A9Q8NBW4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 MTDHP1-201ENST00000605323 784 ntBASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC38A9Q8NBW4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC38A9Q8NBW4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC38A9Q8NBW4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC38A9Q8NBW4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
SLC38A9Q8NBW4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC38A9Q8NBW4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC38A9Q8NBW4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC38A9Q8NBW4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC38A9Q8NBW4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC38A9Q8NBW4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC38A9Q8NBW4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC38A9Q8NBW4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC38A9Q8NBW4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC38A9Q8NBW4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC38A9Q8NBW4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SLC38A9Q8NBW4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC38A9Q8NBW4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC38A9Q8NBW4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SLC38A9Q8NBW4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC38A9Q8NBW4 AC026310.3-201ENST00000625186 2373 ntBASIC19.13■□□□□ 0.65
SLC38A9Q8NBW4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SLC38A9Q8NBW4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SLC38A9Q8NBW4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC38A9Q8NBW4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC38A9Q8NBW4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SLC38A9Q8NBW4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC38A9Q8NBW4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC38A9Q8NBW4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC38A9Q8NBW4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms