Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PAF1Q8N7H5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PAF1Q8N7H5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PAF1Q8N7H5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 AC093787.1-201ENST00000450396 207 ntBASIC20.76■□□□□ 0.91
PAF1Q8N7H5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.76■□□□□ 0.91
PAF1Q8N7H5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 AL137060.1-201ENST00000618151 2648 ntBASIC20.75■□□□□ 0.91
PAF1Q8N7H5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PAF1Q8N7H5 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 AC011484.1-201ENST00000377652 1995 ntBASIC20.74■□□□□ 0.91
PAF1Q8N7H5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 BX276092.2-201ENST00000417668 665 ntBASIC20.74■□□□□ 0.91
PAF1Q8N7H5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 AC104771.1-201ENST00000603335 964 ntBASIC20.74■□□□□ 0.91
PAF1Q8N7H5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.74■□□□□ 0.91
PAF1Q8N7H5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.73■□□□□ 0.91
PAF1Q8N7H5 LSM12P1-201ENST00000411836 588 ntBASIC20.73■□□□□ 0.91
PAF1Q8N7H5 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.73■□□□□ 0.91
PAF1Q8N7H5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PAF1Q8N7H5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PAF1Q8N7H5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PAF1Q8N7H5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PAF1Q8N7H5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PAF1Q8N7H5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PAF1Q8N7H5 TSPY6P-201ENST00000448518 926 ntBASIC20.72■□□□□ 0.91
PAF1Q8N7H5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.72■□□□□ 0.91
PAF1Q8N7H5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PAF1Q8N7H5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.72■□□□□ 0.91
PAF1Q8N7H5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.72■□□□□ 0.91
PAF1Q8N7H5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
PAF1Q8N7H5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PAF1Q8N7H5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms