Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRAM1L1Q8N609 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TRAM1L1Q8N609 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAM1L1Q8N609 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAM1L1Q8N609 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
TRAM1L1Q8N609 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAM1L1Q8N609 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAM1L1Q8N609 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAM1L1Q8N609 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAM1L1Q8N609 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAM1L1Q8N609 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAM1L1Q8N609 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAM1L1Q8N609 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TRAM1L1Q8N609 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAM1L1Q8N609 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAM1L1Q8N609 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAM1L1Q8N609 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAM1L1Q8N609 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAM1L1Q8N609 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAM1L1Q8N609 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAM1L1Q8N609 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRAM1L1Q8N609 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAM1L1Q8N609 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAM1L1Q8N609 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAM1L1Q8N609 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAM1L1Q8N609 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.04■□□□□ 0.8
TRAM1L1Q8N609 AC060766.5-201ENST00000590539 871 ntBASIC20.04■□□□□ 0.8
TRAM1L1Q8N609 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAM1L1Q8N609 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAM1L1Q8N609 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAM1L1Q8N609 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAM1L1Q8N609 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.03■□□□□ 0.8
TRAM1L1Q8N609 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAM1L1Q8N609 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAM1L1Q8N609 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAM1L1Q8N609 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAM1L1Q8N609 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAM1L1Q8N609 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.03■□□□□ 0.8
TRAM1L1Q8N609 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAM1L1Q8N609 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
TRAM1L1Q8N609 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRAM1L1Q8N609 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRAM1L1Q8N609 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRAM1L1Q8N609 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAM1L1Q8N609 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAM1L1Q8N609 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.02■□□□□ 0.8
TRAM1L1Q8N609 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAM1L1Q8N609 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAM1L1Q8N609 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAM1L1Q8N609 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAM1L1Q8N609 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
TRAM1L1Q8N609 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAM1L1Q8N609 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAM1L1Q8N609 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAM1L1Q8N609 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAM1L1Q8N609 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAM1L1Q8N609 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
TRAM1L1Q8N609 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRAM1L1Q8N609 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAM1L1Q8N609 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAM1L1Q8N609 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRAM1L1Q8N609 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.02■□□□□ 0.79
TRAM1L1Q8N609 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 DPP3P2-201ENST00000416030 1696 ntBASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 AC092368.3-202ENST00000574180 1591 ntBASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 RNA5SP413-201ENST00000516373 109 ntBASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 AC023632.3-201ENST00000521633 145 ntBASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 CD99P1-205ENST00000527459 561 ntBASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAM1L1Q8N609 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAM1L1Q8N609 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAM1L1Q8N609 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20■□□□□ 0.79
TRAM1L1Q8N609 AC020907.5-201ENST00000624372 1936 ntBASIC20■□□□□ 0.79
TRAM1L1Q8N609 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TRAM1L1Q8N609 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAM1L1Q8N609 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
TRAM1L1Q8N609 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms