Protein–RNA interactions for Protein: Q8N5Y2

MSL3, Male-specific lethal 3 homolog, humanhuman

Known RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3Q8N5Y2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
MSL3Q8N5Y2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
MSL3Q8N5Y2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
MSL3Q8N5Y2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.2■■□□□ 1.3
MSL3Q8N5Y2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 AC124016.1-201ENST00000609552 612 ntBASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MSL3Q8N5Y2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 RPS2P55-201ENST00000397318 883 ntBASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 AC107956.1-201ENST00000494359 873 ntBASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 AL356652.1-201ENST00000615962 565 ntBASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.18■■□□□ 1.3
MSL3Q8N5Y2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 AP001412.1-201ENST00000608405 714 ntBASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MSL3Q8N5Y2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
MSL3Q8N5Y2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
MSL3Q8N5Y2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.16■■□□□ 1.3
MSL3Q8N5Y2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MSL3Q8N5Y2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
MSL3Q8N5Y2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
MSL3Q8N5Y2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
MSL3Q8N5Y2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.16■■□□□ 1.3
MSL3Q8N5Y2 AL135905.2-201ENST00000584934 1404 ntBASIC23.16■■□□□ 1.3
MSL3Q8N5Y2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MSL3Q8N5Y2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MSL3Q8N5Y2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.16■■□□□ 1.3
MSL3Q8N5Y2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
MSL3Q8N5Y2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.15■■□□□ 1.3
MSL3Q8N5Y2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.15■■□□□ 1.3
MSL3Q8N5Y2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
MSL3Q8N5Y2 AL390719.1-204ENST00000412397 1219 ntBASIC23.15■■□□□ 1.3
MSL3Q8N5Y2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
MSL3Q8N5Y2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.15■■□□□ 1.3
MSL3Q8N5Y2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
MSL3Q8N5Y2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.15■■□□□ 1.3
MSL3Q8N5Y2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.15■■□□□ 1.3
MSL3Q8N5Y2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.15■■□□□ 1.3
MSL3Q8N5Y2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
MSL3Q8N5Y2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
MSL3Q8N5Y2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
MSL3Q8N5Y2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.15■■□□□ 1.3
MSL3Q8N5Y2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
MSL3Q8N5Y2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.14■■□□□ 1.3
MSL3Q8N5Y2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
MSL3Q8N5Y2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
MSL3Q8N5Y2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
MSL3Q8N5Y2 AC239809.2-201ENST00000415381 517 ntBASIC23.14■■□□□ 1.29
MSL3Q8N5Y2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
MSL3Q8N5Y2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.14■■□□□ 1.29
MSL3Q8N5Y2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms