Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39CQ8N584 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39CQ8N584 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39CQ8N584 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.56■■□□□ 1.04
TTC39CQ8N584 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39CQ8N584 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39CQ8N584 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39CQ8N584 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.56■■□□□ 1.04
TTC39CQ8N584 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.56■■□□□ 1.04
TTC39CQ8N584 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.56■■□□□ 1.04
TTC39CQ8N584 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
TTC39CQ8N584 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39CQ8N584 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39CQ8N584 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.56■■□□□ 1.04
TTC39CQ8N584 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39CQ8N584 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.56■■□□□ 1.04
TTC39CQ8N584 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TTC39CQ8N584 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TTC39CQ8N584 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.55■■□□□ 1.04
TTC39CQ8N584 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TTC39CQ8N584 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
TTC39CQ8N584 AL355802.2-201ENST00000402069 882 ntBASIC21.55■■□□□ 1.04
TTC39CQ8N584 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TTC39CQ8N584 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.55■■□□□ 1.04
TTC39CQ8N584 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.55■■□□□ 1.04
TTC39CQ8N584 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TTC39CQ8N584 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TTC39CQ8N584 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.55■■□□□ 1.04
TTC39CQ8N584 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.55■■□□□ 1.04
TTC39CQ8N584 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.55■■□□□ 1.04
TTC39CQ8N584 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TTC39CQ8N584 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TTC39CQ8N584 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TTC39CQ8N584 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TTC39CQ8N584 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.55■■□□□ 1.04
TTC39CQ8N584 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TTC39CQ8N584 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.55■■□□□ 1.04
TTC39CQ8N584 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.55■■□□□ 1.04
TTC39CQ8N584 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.55■■□□□ 1.04
TTC39CQ8N584 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.55■■□□□ 1.04
TTC39CQ8N584 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.54■■□□□ 1.04
TTC39CQ8N584 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.54■■□□□ 1.04
TTC39CQ8N584 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TTC39CQ8N584 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TTC39CQ8N584 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.54■■□□□ 1.04
TTC39CQ8N584 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TTC39CQ8N584 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TTC39CQ8N584 AC023632.3-201ENST00000521633 145 ntBASIC21.54■■□□□ 1.04
TTC39CQ8N584 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TTC39CQ8N584 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
TTC39CQ8N584 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
TTC39CQ8N584 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TTC39CQ8N584 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TTC39CQ8N584 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TTC39CQ8N584 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TTC39CQ8N584 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TTC39CQ8N584 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TTC39CQ8N584 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.53■■□□□ 1.04
TTC39CQ8N584 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TTC39CQ8N584 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.53■■□□□ 1.04
TTC39CQ8N584 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.53■■□□□ 1.04
TTC39CQ8N584 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TTC39CQ8N584 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.53■■□□□ 1.04
TTC39CQ8N584 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TTC39CQ8N584 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.53■■□□□ 1.04
TTC39CQ8N584 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TTC39CQ8N584 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TTC39CQ8N584 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.53■■□□□ 1.04
TTC39CQ8N584 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TTC39CQ8N584 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TTC39CQ8N584 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.52■■□□□ 1.04
TTC39CQ8N584 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TTC39CQ8N584 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TTC39CQ8N584 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.52■■□□□ 1.04
TTC39CQ8N584 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.52■■□□□ 1.04
TTC39CQ8N584 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.52■■□□□ 1.04
TTC39CQ8N584 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TTC39CQ8N584 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TTC39CQ8N584 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TTC39CQ8N584 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TTC39CQ8N584 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TTC39CQ8N584 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TTC39CQ8N584 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
TTC39CQ8N584 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
TTC39CQ8N584 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TTC39CQ8N584 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TTC39CQ8N584 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TTC39CQ8N584 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.51■■□□□ 1.03
TTC39CQ8N584 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TTC39CQ8N584 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
TTC39CQ8N584 AC073314.1-201ENST00000568729 2216 ntBASIC21.51■■□□□ 1.03
TTC39CQ8N584 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.51■■□□□ 1.03
TTC39CQ8N584 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TTC39CQ8N584 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TTC39CQ8N584 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TTC39CQ8N584 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.51■■□□□ 1.03
TTC39CQ8N584 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.51■■□□□ 1.03
TTC39CQ8N584 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.51■■□□□ 1.03
TTC39CQ8N584 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.51■■□□□ 1.03
TTC39CQ8N584 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms