Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCML4Q8N228 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SCML4Q8N228 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.12■□□□□ 0.97
SCML4Q8N228 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.12■□□□□ 0.97
SCML4Q8N228 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.12■□□□□ 0.97
SCML4Q8N228 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.12■□□□□ 0.97
SCML4Q8N228 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SCML4Q8N228 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SCML4Q8N228 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.12■□□□□ 0.97
SCML4Q8N228 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SCML4Q8N228 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCML4Q8N228 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SCML4Q8N228 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCML4Q8N228 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.11■□□□□ 0.97
SCML4Q8N228 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.11■□□□□ 0.97
SCML4Q8N228 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCML4Q8N228 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.11■□□□□ 0.97
SCML4Q8N228 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCML4Q8N228 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SCML4Q8N228 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.11■□□□□ 0.97
SCML4Q8N228 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.11■□□□□ 0.97
SCML4Q8N228 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SCML4Q8N228 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.11■□□□□ 0.97
SCML4Q8N228 RNA5SP413-201ENST00000516373 109 ntBASIC21.11■□□□□ 0.97
SCML4Q8N228 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SCML4Q8N228 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SCML4Q8N228 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCML4Q8N228 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCML4Q8N228 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCML4Q8N228 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SCML4Q8N228 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SCML4Q8N228 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCML4Q8N228 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCML4Q8N228 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCML4Q8N228 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SCML4Q8N228 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SCML4Q8N228 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SCML4Q8N228 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.1■□□□□ 0.97
SCML4Q8N228 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.1■□□□□ 0.97
SCML4Q8N228 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCML4Q8N228 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.1■□□□□ 0.97
SCML4Q8N228 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SCML4Q8N228 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.1■□□□□ 0.97
SCML4Q8N228 AC020907.5-201ENST00000624372 1936 ntBASIC21.1■□□□□ 0.97
SCML4Q8N228 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCML4Q8N228 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCML4Q8N228 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCML4Q8N228 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.09■□□□□ 0.97
SCML4Q8N228 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCML4Q8N228 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCML4Q8N228 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.09■□□□□ 0.97
SCML4Q8N228 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.09■□□□□ 0.97
SCML4Q8N228 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
SCML4Q8N228 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.09■□□□□ 0.97
SCML4Q8N228 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
SCML4Q8N228 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.09■□□□□ 0.97
SCML4Q8N228 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SCML4Q8N228 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCML4Q8N228 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SCML4Q8N228 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCML4Q8N228 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.08■□□□□ 0.97
SCML4Q8N228 AP005212.1-201ENST00000581547 1997 ntBASIC21.08■□□□□ 0.97
SCML4Q8N228 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCML4Q8N228 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCML4Q8N228 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SCML4Q8N228 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCML4Q8N228 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCML4Q8N228 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCML4Q8N228 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCML4Q8N228 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SCML4Q8N228 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.08■□□□□ 0.97
SCML4Q8N228 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.08■□□□□ 0.97
SCML4Q8N228 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCML4Q8N228 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SCML4Q8N228 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.08■□□□□ 0.97
SCML4Q8N228 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.08■□□□□ 0.97
SCML4Q8N228 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SCML4Q8N228 AL031963.3-201ENST00000606441 850 ntBASIC21.08■□□□□ 0.97
SCML4Q8N228 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.08■□□□□ 0.96
SCML4Q8N228 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
SCML4Q8N228 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SCML4Q8N228 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.08■□□□□ 0.96
SCML4Q8N228 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SCML4Q8N228 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCML4Q8N228 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCML4Q8N228 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCML4Q8N228 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCML4Q8N228 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCML4Q8N228 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCML4Q8N228 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCML4Q8N228 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.07■□□□□ 0.96
SCML4Q8N228 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SCML4Q8N228 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.07■□□□□ 0.96
SCML4Q8N228 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.07■□□□□ 0.96
SCML4Q8N228 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.07■□□□□ 0.96
SCML4Q8N228 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.07■□□□□ 0.96
SCML4Q8N228 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
SCML4Q8N228 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.07■□□□□ 0.96
SCML4Q8N228 UNC93B4-201ENST00000505679 747 ntBASIC21.07■□□□□ 0.96
SCML4Q8N228 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms