Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 KRT16P5-201ENST00000455284 522 ntBASIC20.8■□□□□ 0.92
SIX5Q8N196 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.8■□□□□ 0.92
SIX5Q8N196 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.8■□□□□ 0.92
SIX5Q8N196 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.8■□□□□ 0.92
SIX5Q8N196 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.8■□□□□ 0.92
SIX5Q8N196 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SIX5Q8N196 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIX5Q8N196 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIX5Q8N196 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SIX5Q8N196 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SIX5Q8N196 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SIX5Q8N196 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIX5Q8N196 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIX5Q8N196 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIX5Q8N196 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIX5Q8N196 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIX5Q8N196 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIX5Q8N196 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.79■□□□□ 0.92
SIX5Q8N196 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.79■□□□□ 0.92
SIX5Q8N196 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.79■□□□□ 0.92
SIX5Q8N196 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIX5Q8N196 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.79■□□□□ 0.92
SIX5Q8N196 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SIX5Q8N196 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.79■□□□□ 0.92
SIX5Q8N196 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.79■□□□□ 0.92
SIX5Q8N196 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.79■□□□□ 0.92
SIX5Q8N196 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIX5Q8N196 RNF165-205ENST00000588679 2904 ntBASIC20.79■□□□□ 0.92
SIX5Q8N196 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIX5Q8N196 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.78■□□□□ 0.92
SIX5Q8N196 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SIX5Q8N196 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIX5Q8N196 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIX5Q8N196 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIX5Q8N196 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIX5Q8N196 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIX5Q8N196 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIX5Q8N196 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIX5Q8N196 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIX5Q8N196 AC113347.1-201ENST00000413321 391 ntBASIC20.78■□□□□ 0.92
SIX5Q8N196 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.78■□□□□ 0.92
SIX5Q8N196 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.78■□□□□ 0.92
SIX5Q8N196 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.78■□□□□ 0.92
SIX5Q8N196 AP000525.1-201ENST00000608286 694 ntBASIC20.78■□□□□ 0.92
SIX5Q8N196 AL356652.1-201ENST00000615962 565 ntBASIC20.78■□□□□ 0.92
SIX5Q8N196 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIX5Q8N196 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SIX5Q8N196 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIX5Q8N196 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIX5Q8N196 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.77■□□□□ 0.92
SIX5Q8N196 AC079598.2-202ENST00000546624 1451 ntBASIC20.77■□□□□ 0.92
SIX5Q8N196 LINC01568-207ENST00000641790 1380 ntBASIC20.77■□□□□ 0.92
SIX5Q8N196 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIX5Q8N196 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.77■□□□□ 0.92
SIX5Q8N196 UNC93B2-201ENST00000285383 730 ntBASIC20.77■□□□□ 0.92
SIX5Q8N196 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SIX5Q8N196 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.77■□□□□ 0.92
SIX5Q8N196 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.77■□□□□ 0.92
SIX5Q8N196 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.77■□□□□ 0.92
SIX5Q8N196 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.77■□□□□ 0.92
SIX5Q8N196 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.77■□□□□ 0.92
SIX5Q8N196 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.77■□□□□ 0.92
SIX5Q8N196 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.77■□□□□ 0.92
SIX5Q8N196 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.77■□□□□ 0.91
SIX5Q8N196 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SIX5Q8N196 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIX5Q8N196 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIX5Q8N196 MIR1238-201ENST00000408483 83 ntBASIC20.76■□□□□ 0.91
SIX5Q8N196 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.76■□□□□ 0.91
SIX5Q8N196 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.76■□□□□ 0.91
SIX5Q8N196 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIX5Q8N196 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIX5Q8N196 AC073195.1-201ENST00000607241 877 ntBASIC20.76■□□□□ 0.91
SIX5Q8N196 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIX5Q8N196 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIX5Q8N196 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIX5Q8N196 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
SIX5Q8N196 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIX5Q8N196 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIX5Q8N196 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SIX5Q8N196 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIX5Q8N196 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.75■□□□□ 0.91
SIX5Q8N196 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.75■□□□□ 0.91
SIX5Q8N196 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SIX5Q8N196 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.75■□□□□ 0.91
SIX5Q8N196 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.75■□□□□ 0.91
SIX5Q8N196 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SIX5Q8N196 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SIX5Q8N196 AL121829.2-201ENST00000620908 328 ntBASIC20.75■□□□□ 0.91
SIX5Q8N196 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SIX5Q8N196 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.75■□□□□ 0.91
SIX5Q8N196 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.75■□□□□ 0.91
SIX5Q8N196 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIX5Q8N196 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.75■□□□□ 0.91
SIX5Q8N196 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIX5Q8N196 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.75■□□□□ 0.91
SIX5Q8N196 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SIX5Q8N196 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIX5Q8N196 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SIX5Q8N196 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms