Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCN4BQ8IWT1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.4■■□□□ 1.02
SCN4BQ8IWT1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCN4BQ8IWT1 AC073648.6-201ENST00000641589 218 ntBASIC21.4■■□□□ 1.02
SCN4BQ8IWT1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCN4BQ8IWT1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCN4BQ8IWT1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
SCN4BQ8IWT1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.39■■□□□ 1.02
SCN4BQ8IWT1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SCN4BQ8IWT1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SCN4BQ8IWT1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SCN4BQ8IWT1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SCN4BQ8IWT1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCN4BQ8IWT1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCN4BQ8IWT1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.39■■□□□ 1.01
SCN4BQ8IWT1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCN4BQ8IWT1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.39■■□□□ 1.01
SCN4BQ8IWT1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.39■■□□□ 1.01
SCN4BQ8IWT1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCN4BQ8IWT1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.39■■□□□ 1.01
SCN4BQ8IWT1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SCN4BQ8IWT1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 AC006557.6-201ENST00000623071 864 ntBASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SCN4BQ8IWT1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 FP700111.2-201ENST00000619190 1892 ntBASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.37■■□□□ 1.01
SCN4BQ8IWT1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SCN4BQ8IWT1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 AC006128.1-201ENST00000624704 1661 ntBASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 KRT17P3-201ENST00000420566 1262 ntBASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 AC098590.1-201ENST00000468126 897 ntBASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 AL121603.2-201ENST00000557373 2117 ntBASIC21.35■■□□□ 1.01
SCN4BQ8IWT1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms