Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 FP700111.2-201ENST00000619190 1892 ntBASIC22.6■■□□□ 1.21
CCDC60Q8IWA6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC60Q8IWA6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.6■■□□□ 1.21
CCDC60Q8IWA6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC60Q8IWA6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
CCDC60Q8IWA6 POM121L13P-201ENST00000422362 380 ntBASIC22.6■■□□□ 1.21
CCDC60Q8IWA6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.6■■□□□ 1.21
CCDC60Q8IWA6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
CCDC60Q8IWA6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.6■■□□□ 1.21
CCDC60Q8IWA6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC60Q8IWA6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.6■■□□□ 1.21
CCDC60Q8IWA6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC60Q8IWA6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC60Q8IWA6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.6■■□□□ 1.21
CCDC60Q8IWA6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.6■■□□□ 1.21
CCDC60Q8IWA6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.59■■□□□ 1.21
CCDC60Q8IWA6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC60Q8IWA6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC60Q8IWA6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CCDC60Q8IWA6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC60Q8IWA6 KRT17P3-201ENST00000420566 1262 ntBASIC22.59■■□□□ 1.21
CCDC60Q8IWA6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CCDC60Q8IWA6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC60Q8IWA6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC60Q8IWA6 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.59■■□□□ 1.21
CCDC60Q8IWA6 AC142381.4-202ENST00000563973 229 ntBASIC22.59■■□□□ 1.21
CCDC60Q8IWA6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC60Q8IWA6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.59■■□□□ 1.21
CCDC60Q8IWA6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CCDC60Q8IWA6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC60Q8IWA6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CCDC60Q8IWA6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.59■■□□□ 1.21
CCDC60Q8IWA6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC60Q8IWA6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC60Q8IWA6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC60Q8IWA6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC60Q8IWA6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC60Q8IWA6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC60Q8IWA6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
CCDC60Q8IWA6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC60Q8IWA6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC60Q8IWA6 AL158047.1-201ENST00000445918 881 ntBASIC22.58■■□□□ 1.21
CCDC60Q8IWA6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.58■■□□□ 1.21
CCDC60Q8IWA6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC60Q8IWA6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.58■■□□□ 1.21
CCDC60Q8IWA6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC60Q8IWA6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC60Q8IWA6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC60Q8IWA6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
CCDC60Q8IWA6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CCDC60Q8IWA6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
CCDC60Q8IWA6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC60Q8IWA6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 AC120498.8-201ENST00000614275 531 ntBASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CCDC60Q8IWA6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC60Q8IWA6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC60Q8IWA6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC60Q8IWA6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC60Q8IWA6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CCDC60Q8IWA6 AL359736.2-201ENST00000621992 437 ntBASIC22.55■■□□□ 1.2
CCDC60Q8IWA6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms